RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
TNFRSF9-203ENST00000492571 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
TNFRSF9-203ENST00000492571 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
TNFRSF9-203ENST00000492571 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
TNFRSF9-203ENST00000492571 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
TNFRSF9-203ENST00000492571 SBF1O95248 1867 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 FOXN1O15353 648 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 SRGNP10124 158 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 TJP1Q07157 1748 aa13.1□□□□□ -0.31
TNFRSF9-203ENST00000492571 CNTNAP1P78357 1384 aa13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 RGL2O15211 777 aa13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 TPTE2Q6XPS3 522 aa13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
TNFRSF9-203ENST00000492571 A1BGP04217 495 aa13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 NPR1P16066 1061 aa13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 RTKN2Q8IZC4 609 aa13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
TNFRSF9-203ENST00000492571 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 VEGFBP49765 207 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 MRC1P22897 1456 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 PASKQ96RG2 1323 aa13.07□□□□□ -0.32
TNFRSF9-203ENST00000492571 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 EPHX2P34913 555 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 IL17REQ8NFR9 667 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 JDP2Q8WYK2 163 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
TNFRSF9-203ENST00000492571 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 LBX1P52954 281 aa13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-203ENST00000492571 STK25O00506 426 aa13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 EMP3P54852 163 aa13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
TNFRSF9-203ENST00000492571 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 EIF6P56537 245 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 GPC2Q8N158 579 aa13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNFRSF9-203ENST00000492571 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 ECE1P42892 770 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 TMX4Q9H1E5 349 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
TNFRSF9-203ENST00000492571 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
TNFRSF9-203ENST00000492571 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
TNFRSF9-203ENST00000492571 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
TNFRSF9-203ENST00000492571 FZD9O00144 591 aa13□□□□□ -0.33
TNFRSF9-203ENST00000492571 ABHD8Q96I13 439 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms