RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
HDAC9-225ENST00000490851 SIL1Q9H173 461 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 FNBP4Q8N3X1 1017 aaPredicted RBP12.4□□□□□ -0.42
HDAC9-225ENST00000490851 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
HDAC9-225ENST00000490851 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
HDAC9-225ENST00000490851 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
HDAC9-225ENST00000490851 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.42
HDAC9-225ENST00000490851 UTYO14607 1347 aa12.4□□□□□ -0.43
HDAC9-225ENST00000490851 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
HDAC9-225ENST00000490851 PDE1AP54750 535 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 MX1P20591 662 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 MTX1Q13505 466 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
HDAC9-225ENST00000490851 CHMP3Q9Y3E7 222 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 AFF2P51816 1311 aa12.39□□□□□ -0.43
HDAC9-225ENST00000490851 SDSP20132 328 aa12.38□□□□□ -0.43
HDAC9-225ENST00000490851 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
HDAC9-225ENST00000490851 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
HDAC9-225ENST00000490851 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
HDAC9-225ENST00000490851 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
HDAC9-225ENST00000490851 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
HDAC9-225ENST00000490851 BRPF3Q9ULD4 1205 aa12.38□□□□□ -0.43
HDAC9-225ENST00000490851 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 CDC45O75419 566 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 GPTP24298 496 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 KCNQ4P56696 695 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 SIK1P57059 783 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 TBC1D32Q96NH3 1257 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 PRDM4Q9UKN5 801 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
HDAC9-225ENST00000490851 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
HDAC9-225ENST00000490851 HLFQ16534 295 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC9-225ENST00000490851 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
HDAC9-225ENST00000490851 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 TJP1Q07157 1748 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 ITPK1Q13572 414 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
HDAC9-225ENST00000490851 CASP7P55210 303 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
HDAC9-225ENST00000490851 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
HDAC9-225ENST00000490851 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
HDAC9-225ENST00000490851 H7C1W4 665 aa12.34□□□□□ -0.43
HDAC9-225ENST00000490851 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
HDAC9-225ENST00000490851 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
HDAC9-225ENST00000490851 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
HDAC9-225ENST00000490851 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
HDAC9-225ENST00000490851 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
HDAC9-225ENST00000490851 AACSQ86V21 672 aa12.33□□□□□ -0.43
HDAC9-225ENST00000490851 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.43
HDAC9-225ENST00000490851 FAM89AQ96GI7 184 aa12.33□□□□□ -0.43
HDAC9-225ENST00000490851 EP400Q96L91 3159 aa12.33□□□□□ -0.43
HDAC9-225ENST00000490851 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.43
HDAC9-225ENST00000490851 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
HDAC9-225ENST00000490851 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
HDAC9-225ENST00000490851 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
HDAC9-225ENST00000490851 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
HDAC9-225ENST00000490851 SASH1O94885 1247 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 IFIT2P09913 472 aaKnown RBP12.32□□□□□ -0.44
HDAC9-225ENST00000490851 FOXO4P98177 505 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
HDAC9-225ENST00000490851 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 CASC1Q6TDU7 716 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
HDAC9-225ENST00000490851 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-225ENST00000490851 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
HDAC9-225ENST00000490851 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 SMIM5Q71RC9 77 aa12.31□□□□□ -0.44
HDAC9-225ENST00000490851 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-225ENST00000490851 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-225ENST00000490851 EIF5P55010 431 aaKnown RBP12.3□□□□□ -0.44
HDAC9-225ENST00000490851 TFCP2Q12800 502 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 EAF2Q96CJ1 260 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-225ENST00000490851 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
HDAC9-225ENST00000490851 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
HDAC9-225ENST00000490851 THSD7AQ9UPZ6 1657 aa12.29□□□□□ -0.44
HDAC9-225ENST00000490851 COPRSQ9NQ92 184 aa12.29□□□□□ -0.44
HDAC9-225ENST00000490851 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms