RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TRIM28Q13263 835 aaKnown RBP24.61■■□□□ 1.53
EPHB4-207ENST00000489808 PRPF40BQ6NWY9 871 aaKnown RBP24.61■■□□□ 1.53
EPHB4-207ENST00000489808 STK31Q9BXU1 1019 aa24.61■■□□□ 1.53
EPHB4-207ENST00000489808 ZNF219Q9P2Y4 722 aaPredicted RBP24.61■■□□□ 1.53
EPHB4-207ENST00000489808 ATP5J2-PTCD1G3V325 749 aa24.6■■□□□ 1.53
EPHB4-207ENST00000489808 ALDH1B1P30837 517 aa24.6■■□□□ 1.53
EPHB4-207ENST00000489808 C9orf131Q5VYM1 1079 aa24.6■■□□□ 1.53
EPHB4-207ENST00000489808 TRMT112Q9UI30 125 aaKnown RBP24.6■■□□□ 1.53
EPHB4-207ENST00000489808 RNF123Q5XPI4 1314 aa24.6■■□□□ 1.53
EPHB4-207ENST00000489808 SLC4A2P04920 1241 aa24.59■■□□□ 1.53
EPHB4-207ENST00000489808 MIER1Q8N108 512 aa24.59■■□□□ 1.53
EPHB4-207ENST00000489808 C7orf43Q8WVR3 580 aa24.59■■□□□ 1.53
EPHB4-207ENST00000489808 NLRP3Q96P20 1036 aa24.59■■□□□ 1.53
EPHB4-207ENST00000489808 ADCY9O60503 1353 aa24.58■■□□□ 1.53
EPHB4-207ENST00000489808 DDX58O95786 925 aaKnown RBP24.58■■□□□ 1.53
EPHB4-207ENST00000489808 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
EPHB4-207ENST00000489808 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
EPHB4-207ENST00000489808 C3orf67Q6ZVT6 689 aa24.57■■□□□ 1.52
EPHB4-207ENST00000489808 RIC1Q4ADV7 1423 aa24.57■■□□□ 1.52
EPHB4-207ENST00000489808 ARFGEF1Q9Y6D6 1849 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 NFKBIEO00221 500 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 RASSF7Q02833 373 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 KSR2Q6VAB6 950 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 G2E3Q7L622 706 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 ZNF428Q96B54 188 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 SH3TC1Q8TE82 1336 aa24.56■■□□□ 1.52
EPHB4-207ENST00000489808 HCLS1P14317 486 aaPredicted RBP24.55■■□□□ 1.52
EPHB4-207ENST00000489808 SOGA3Q5TF21 947 aa24.55■■□□□ 1.52
EPHB4-207ENST00000489808 RPGRQ92834 1020 aaKnown RBP24.55■■□□□ 1.52
EPHB4-207ENST00000489808 MYD88Q99836 296 aa24.55■■□□□ 1.52
EPHB4-207ENST00000489808 METTL22Q9BUU2 404 aaPredicted RBP24.55■■□□□ 1.52
EPHB4-207ENST00000489808 RNF181Q9P0P0 153 aa24.55■■□□□ 1.52
EPHB4-207ENST00000489808 DLEC1Q9Y238 1755 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 PI4KAP2A4QPH2 592 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 LMNB1P20700 586 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 PRELPP51888 382 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 PI4KAP1Q8N8J0 262 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 FAM89AQ96GI7 184 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 RBM17Q96I25 401 aaKnown RBP24.54■■□□□ 1.52
EPHB4-207ENST00000489808 CRAMP1Q96RY5 1269 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 MAP3K2Q9Y2U5 619 aa24.54■■□□□ 1.52
EPHB4-207ENST00000489808 COL11A2P13942 1736 aaPredicted RBP24.52■■□□□ 1.52
EPHB4-207ENST00000489808 E9PSI1 815 aa24.52■■□□□ 1.52
EPHB4-207ENST00000489808 SLFN5Q08AF3 891 aa24.51■■□□□ 1.51
EPHB4-207ENST00000489808 CCDC191Q8NCU4 936 aa24.51■■□□□ 1.51
EPHB4-207ENST00000489808 ZNF526Q8TF50 670 aaPredicted RBP24.51■■□□□ 1.51
EPHB4-207ENST00000489808 GPBP1L1Q9HC44 474 aaPredicted RBP24.51■■□□□ 1.51
EPHB4-207ENST00000489808 FLIIQ13045 1269 aa24.5■■□□□ 1.51
EPHB4-207ENST00000489808 CCDC93Q567U6 631 aa24.5■■□□□ 1.51
EPHB4-207ENST00000489808 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
EPHB4-207ENST00000489808 ZBTB38Q8NAP3 1195 aaPredicted RBP24.5■■□□□ 1.51
EPHB4-207ENST00000489808 TAOK3Q9H2K8 898 aa24.5■■□□□ 1.51
EPHB4-207ENST00000489808 SLX4Q8IY92 1834 aa24.49■■□□□ 1.51
EPHB4-207ENST00000489808 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
EPHB4-207ENST00000489808 RTKN2Q8IZC4 609 aa24.49■■□□□ 1.51
EPHB4-207ENST00000489808 LTBP3Q9NS15 1303 aa24.49■■□□□ 1.51
EPHB4-207ENST00000489808 CWC25Q9NXE8 425 aaPredicted RBP24.48■■□□□ 1.51
EPHB4-207ENST00000489808 TNRC6CQ9HCJ0 1690 aaKnown RBP24.47■■□□□ 1.51
EPHB4-207ENST00000489808 IRS4O14654 1257 aaPredicted RBP24.47■■□□□ 1.51
EPHB4-207ENST00000489808 IGKV5-2P06315 115 aa24.47■■□□□ 1.51
EPHB4-207ENST00000489808 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
EPHB4-207ENST00000489808 CDCA7LQ96GN5 454 aa24.47■■□□□ 1.51
EPHB4-207ENST00000489808 PCCAP05165 728 aaPredicted RBP24.46■■□□□ 1.51
EPHB4-207ENST00000489808 NEXNQ0ZGT2 675 aa24.46■■□□□ 1.51
EPHB4-207ENST00000489808 FKBP5Q13451 457 aaPredicted RBP24.46■■□□□ 1.51
EPHB4-207ENST00000489808 SF3B3Q15393 1217 aaKnown RBP24.46■■□□□ 1.51
EPHB4-207ENST00000489808 BBOX1O75936 387 aa24.45■■□□□ 1.5
EPHB4-207ENST00000489808 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.5
EPHB4-207ENST00000489808 DDX46Q7L014 1031 aaKnown RBP24.45■■□□□ 1.5
EPHB4-207ENST00000489808 TRMT2AQ8IZ69 625 aaKnown RBP24.45■■□□□ 1.5
EPHB4-207ENST00000489808 ABCC4O15439 1325 aa24.44■■□□□ 1.5
EPHB4-207ENST00000489808 ZC3H4Q9UPT8 1303 aaKnown RBP24.44■■□□□ 1.5
EPHB4-207ENST00000489808 PPEF1O14829 653 aaPredicted RBP24.44■■□□□ 1.5
EPHB4-207ENST00000489808 ANKRD36CQ5JPF3 1778 aa24.44■■□□□ 1.5
EPHB4-207ENST00000489808 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
EPHB4-207ENST00000489808 GRIPAP1Q4V328 841 aa24.43■■□□□ 1.5
EPHB4-207ENST00000489808 DNAAF4Q8WXU2 420 aa24.43■■□□□ 1.5
EPHB4-207ENST00000489808 JARID2Q92833 1246 aaPredicted RBP24.43■■□□□ 1.5
EPHB4-207ENST00000489808 NEURL1BA8MQ27 555 aa24.42■■□□□ 1.5
EPHB4-207ENST00000489808 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
EPHB4-207ENST00000489808 ATP6V0A2Q9Y487 856 aa24.42■■□□□ 1.5
EPHB4-207ENST00000489808 GRAPQ13588 217 aa24.41■■□□□ 1.5
EPHB4-207ENST00000489808 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
EPHB4-207ENST00000489808 PSMD1Q99460 953 aa24.41■■□□□ 1.5
EPHB4-207ENST00000489808 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
EPHB4-207ENST00000489808 ARFGEF2Q9Y6D5 1785 aa24.4■■□□□ 1.5
EPHB4-207ENST00000489808 SP8Q8IXZ3 490 aa24.4■■□□□ 1.5
EPHB4-207ENST00000489808 TMX4Q9H1E5 349 aaPredicted RBP24.4■■□□□ 1.5
EPHB4-207ENST00000489808 KDM2BQ8NHM5 1336 aa24.39■■□□□ 1.5
EPHB4-207ENST00000489808 GLTPD2A6NH11 291 aa24.39■■□□□ 1.49
EPHB4-207ENST00000489808 KIF3CO14782 793 aa24.39■■□□□ 1.49
EPHB4-207ENST00000489808 PDE8AO60658 829 aa24.39■■□□□ 1.49
EPHB4-207ENST00000489808 SLC51AQ86UW1 340 aa24.39■■□□□ 1.49
EPHB4-207ENST00000489808 LINS1Q8NG48 757 aa24.39■■□□□ 1.49
EPHB4-207ENST00000489808 F6X3S4 739 aa24.38■■□□□ 1.49
EPHB4-207ENST00000489808 H7C1W4 665 aa24.38■■□□□ 1.49
EPHB4-207ENST00000489808 NMRK2Q9NPI5 230 aa24.38■■□□□ 1.49
EPHB4-207ENST00000489808 SBF1O95248 1867 aa24.38■■□□□ 1.49
EPHB4-207ENST00000489808 CDHR2Q9BYE9 1310 aa24.37■■□□□ 1.49
EPHB4-207ENST00000489808 SNED1Q8TER0 1413 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms