RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FMR1NBQ8N0W7 255 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-219ENST00000488035 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.9□□□□□ -1.46
R3HDM1-219ENST00000488035 BHMTQ93088 406 aa5.9□□□□□ -1.46
R3HDM1-219ENST00000488035 SLC6A14Q9UN76 642 aa5.9□□□□□ -1.46
R3HDM1-219ENST00000488035 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 HIRAP54198 1017 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 EPHA4P54764 986 aa5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 CLUAP1Q96AJ1 413 aa5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 POM121Q96HA1 1249 aa5.89□□□□□ -1.47
R3HDM1-219ENST00000488035 ABL2P42684 1182 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 CD97P48960 835 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 AFF1P51825 1210 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 PSMA6P60900 246 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 FLIIQ13045 1269 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 HIF1AQ16665 826 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 NFATC2IPQ8NCF5 419 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 IGFLR1Q9H665 355 aa5.88□□□□□ -1.47
R3HDM1-219ENST00000488035 RGS9O75916 674 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 SKIP12755 728 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 TYRO3Q06418 890 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 PCSK7Q16549 785 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 TBCELQ5QJ74 424 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 DMRTC2Q8IXT2 367 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 TNS4Q8IZW8 715 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 NUDT8Q8WV74 236 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 GDPD2Q9HCC8 539 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 PCMTD2Q9NV79 361 aa5.87□□□□□ -1.47
R3HDM1-219ENST00000488035 SUPT5HO00267 1087 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 IRAK1P51617 712 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 PSAPL1Q6NUJ1 521 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 TRIM50Q86XT4 487 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 WFDC12Q8WWY7 111 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 HSH2DQ96JZ2 352 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 SUSD3Q96L08 255 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 PNMA5Q96PV4 448 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 PHACTR1Q9C0D0 580 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 ZMYND15Q9H091 742 aa5.86□□□□□ -1.47
R3HDM1-219ENST00000488035 KIAA1324LA8MWY0 1029 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 SH3PXD2AQ5TCZ1 1133 aa5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 PRR23CQ6ZRP0 262 aa5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 FBXO11Q86XK2 927 aa5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 DNAJB12Q9NXW2 375 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 HCN4Q9Y3Q4 1203 aa5.85□□□□□ -1.47
R3HDM1-219ENST00000488035 PIK3CDO00329 1044 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 UBTFP17480 764 aaKnown RBP5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 IREB2P48200 963 aaKnown RBP5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 NCOA4Q13772 614 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 MSL1Q68DK7 614 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 POTEAQ6S8J7 498 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 IGF2-ASQ6U949 168 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 ERICH6Q7L0X2 663 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 COG6Q9Y2V7 657 aa5.84□□□□□ -1.47
R3HDM1-219ENST00000488035 NOS3P29474 1203 aa5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 ATP1A2P50993 1020 aa5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 BTLAQ7Z6A9 289 aa5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 ZNF280CQ8ND82 737 aa5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 OAS3Q9Y6K5 1087 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-219ENST00000488035 M0R2N6 131 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 CCINQ13939 588 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 FAM35AQ86V20 835 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 DZIP1LQ8IYY4 767 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 TPCN2Q8NHX9 752 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 TSPAN10Q9H1Z9 355 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 C1orf115Q9H7X2 142 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 FRRS1LQ9P0K9 344 aa5.82□□□□□ -1.48
R3HDM1-219ENST00000488035 FSTP19883 344 aa5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 WFDC8Q8IUA0 241 aa5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 FNBP4Q8N3X1 1017 aaPredicted RBP5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 MEGF10Q96KG7 1140 aa5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 GSX2Q9BZM3 304 aa5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 NAGPAQ9UK23 515 aa5.81□□□□□ -1.48
R3HDM1-219ENST00000488035 A6NJR5 290 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 ARID3CA6NKF2 412 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 USP17L5A8MUK1 530 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 PPP1R12BO60237 982 aaPredicted RBP5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 MED26O95402 600 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 EPB42P16452 691 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 NFKB1P19838 968 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 IER5Q5VY09 327 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 CCDC102BQ68D86 513 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 WWC1Q8IX03 1113 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 STAG2Q8N3U4 1231 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 TTC9Q92623 222 aa5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 RBM19Q9Y4C8 960 aaKnown RBP5.8□□□□□ -1.48
R3HDM1-219ENST00000488035 PTCD1O75127 700 aaKnown RBP5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 MAP3K6O95382 1288 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 ARID4AP29374 1257 aaPredicted RBP5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 SSTR4P31391 388 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 JAG1P78504 1218 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 ELMSAN1Q6PJG2 1045 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 PROSER2Q86WR7 435 aaPredicted RBP5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 ALDH16A1Q8IZ83 802 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 DCAF11Q8TEB1 546 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 ALG2Q9H553 416 aa5.79□□□□□ -1.48
R3HDM1-219ENST00000488035 AKTIPQ9H8T0 292 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms