RNA–Protein interactions for RNA: ENST00000487803.5

SMIM7-209, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best)

Gene SMIM7, Length 2,190 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-209ENST00000487803 GPT2Q8TD30 523 aa12.4□□□□□ -0.42
SMIM7-209ENST00000487803 KCNB2Q92953 911 aa12.4□□□□□ -0.42
SMIM7-209ENST00000487803 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
SMIM7-209ENST00000487803 MYD88Q99836 296 aa12.4□□□□□ -0.42
SMIM7-209ENST00000487803 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
SMIM7-209ENST00000487803 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
SMIM7-209ENST00000487803 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
SMIM7-209ENST00000487803 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 MBD3O95983 291 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
SMIM7-209ENST00000487803 AK2P54819 239 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 SNRKQ9NRH2 765 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
SMIM7-209ENST00000487803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
SMIM7-209ENST00000487803 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
SMIM7-209ENST00000487803 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
SMIM7-209ENST00000487803 PTH1RQ03431 593 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
SMIM7-209ENST00000487803 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 LIMCH1Q9UPQ0 1083 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 CCDC171Q6TFL3 1326 aa12.38□□□□□ -0.43
SMIM7-209ENST00000487803 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 SIL1Q9H173 461 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
SMIM7-209ENST00000487803 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
SMIM7-209ENST00000487803 WNK3Q9BYP7 1800 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 TOM1O60784 492 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 RFX5P48382 616 aaPredicted RBP12.36□□□□□ -0.43
SMIM7-209ENST00000487803 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
SMIM7-209ENST00000487803 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
SMIM7-209ENST00000487803 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 TMEM63CQ9P1W3 806 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 ITGB4P16144 1822 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 PTPN12Q05209 780 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 RBM8AQ9Y5S9 174 aaKnown RBP12.35□□□□□ -0.43
SMIM7-209ENST00000487803 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
SMIM7-209ENST00000487803 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 CLCN1P35523 988 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 CASP7P55210 303 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 UBE3BQ7Z3V4 1068 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
SMIM7-209ENST00000487803 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 JCADQ9P266 1359 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
SMIM7-209ENST00000487803 A0A087WZG4 1122 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.44
SMIM7-209ENST00000487803 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
SMIM7-209ENST00000487803 CPA1P15085 419 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 ATP5JP18859 108 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
SMIM7-209ENST00000487803 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 FPGT-TNNI3KV9GXZ4 949 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
SMIM7-209ENST00000487803 NWD2Q9ULI1 1742 aa12.32□□□□□ -0.44
SMIM7-209ENST00000487803 ESPNB1AK53 854 aa12.32□□□□□ -0.44
SMIM7-209ENST00000487803 STX6O43752 255 aa12.32□□□□□ -0.44
SMIM7-209ENST00000487803 PSMA5P28066 241 aa12.32□□□□□ -0.44
SMIM7-209ENST00000487803 KCNJ4P48050 445 aa12.32□□□□□ -0.44
SMIM7-209ENST00000487803 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
SMIM7-209ENST00000487803 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms