RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 AIDAQ96BJ3 306 aa13.93□□□□□ -0.18
TRA2B-214ENST00000487615 IL15P40933 162 aaPredicted RBP13.93□□□□□ -0.18
TRA2B-214ENST00000487615 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
TRA2B-214ENST00000487615 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
TRA2B-214ENST00000487615 ZSCAN22P10073 491 aaPredicted RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 HMGN5P82970 282 aaKnown RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 METTL22Q9BUU2 404 aaPredicted RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 CDKL5O76039 1030 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 MAP3K11Q16584 847 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 ZSCAN23Q3MJ62 389 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
TRA2B-214ENST00000487615 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 SNRKQ9NRH2 765 aa13.92□□□□□ -0.18
TRA2B-214ENST00000487615 AK2P54819 239 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 TRIM22Q8IYM9 498 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 SGSM2O43147 1006 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 TDO2P48775 406 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 RAD50Q92878 1312 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
TRA2B-214ENST00000487615 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
TRA2B-214ENST00000487615 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 BRMS1Q9HCU9 246 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
TRA2B-214ENST00000487615 CCDC69A6NI79 296 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 NECAB1Q8N987 351 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 ADAMTS2O95450 1211 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 UBE2HP62256 183 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 BEND3Q5T5X7 828 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
TRA2B-214ENST00000487615 CCDC171Q6TFL3 1326 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
TRA2B-214ENST00000487615 ZNF213O14771 459 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 MPNDQ8N594 471 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 OSBPL3Q9H4L5 887 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 NPHP4O75161 1426 aaPredicted RBP13.89□□□□□ -0.19
TRA2B-214ENST00000487615 TFCP2Q12800 502 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 PLBD2Q8NHP8 589 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 ZNF592Q92610 1267 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 DDX17Q92841 729 aaKnown RBP13.89□□□□□ -0.19
TRA2B-214ENST00000487615 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
TRA2B-214ENST00000487615 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
TRA2B-214ENST00000487615 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
TRA2B-214ENST00000487615 GCKRQ14397 625 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 RIMBP3CA6NJZ7 1639 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 RIMBP3BA6NNM3 1639 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 RIMBP3Q9UFD9 1639 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 MARCH6O60337 910 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 MAP3K12Q12852 859 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 VPS53Q5VIR6 699 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 BRF1Q92994 677 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 LRSAM1Q6UWE0 723 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 RAI14Q9P0K7 980 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 TMEM131LA2VDJ0 1609 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 SLC5A1P13866 664 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 CCT2P78371 535 aaKnown RBP13.88□□□□□ -0.19
TRA2B-214ENST00000487615 CAMK4Q16566 473 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 NAPBQ9H115 298 aa13.88□□□□□ -0.19
TRA2B-214ENST00000487615 KDRP35968 1356 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
TRA2B-214ENST00000487615 FAM13BQ9NYF5 915 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 TFIP11Q9UBB9 837 aaKnown RBP13.87□□□□□ -0.19
TRA2B-214ENST00000487615 TPM1P09493 284 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
TRA2B-214ENST00000487615 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
TRA2B-214ENST00000487615 F13A1P00488 732 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 PHKG2P15735 406 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
TRA2B-214ENST00000487615 USP31Q70CQ4 1352 aa13.87□□□□□ -0.19
TRA2B-214ENST00000487615 USP48Q86UV5 1035 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 C8orf76Q96K31 380 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 SSH2Q76I76 1423 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 HSPA4P34932 840 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 RUFY3Q7L099 469 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
TRA2B-214ENST00000487615 HAND2P61296 217 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms