RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 LRP5O75197 1615 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
POLR1A-208ENST00000486964 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 MAP3K15Q6ZN16 1313 aa11.8□□□□□ -0.52
POLR1A-208ENST00000486964 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
POLR1A-208ENST00000486964 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
POLR1A-208ENST00000486964 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
POLR1A-208ENST00000486964 TJP1Q07157 1748 aa11.79□□□□□ -0.52
POLR1A-208ENST00000486964 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
POLR1A-208ENST00000486964 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 MCM4P33991 863 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
POLR1A-208ENST00000486964 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
POLR1A-208ENST00000486964 PLEKHM2Q8IWE5 1019 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
POLR1A-208ENST00000486964 GOLGA6L3A6NEY3 463 aa11.77□□□□□ -0.52
POLR1A-208ENST00000486964 SRGAP3O43295 1099 aa11.77□□□□□ -0.52
POLR1A-208ENST00000486964 RAB11FIP3O75154 756 aa11.77□□□□□ -0.52
POLR1A-208ENST00000486964 HLFQ16534 295 aa11.77□□□□□ -0.52
POLR1A-208ENST00000486964 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.52
POLR1A-208ENST00000486964 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.52
POLR1A-208ENST00000486964 RREB1Q92766 1687 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 A0A087WZG4 1122 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 RGL2O15211 777 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 RFX5P48382 616 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-208ENST00000486964 FOXO4P98177 505 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-208ENST00000486964 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 GBP4Q96PP9 640 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 OSBPL3Q9H4L5 887 aa11.77□□□□□ -0.53
POLR1A-208ENST00000486964 BICC1Q9H694 974 aaKnown RBP11.77□□□□□ -0.53
POLR1A-208ENST00000486964 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
POLR1A-208ENST00000486964 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
POLR1A-208ENST00000486964 EXOC6BQ9Y2D4 811 aa11.76□□□□□ -0.53
POLR1A-208ENST00000486964 CNTNAP4Q9C0A0 1308 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 NUP188Q5SRE5 1749 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 A0A0G2JS52 829 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-208ENST00000486964 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-208ENST00000486964 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 SKOR2Q2VWA4 1001 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-208ENST00000486964 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
POLR1A-208ENST00000486964 ARFGEF2Q9Y6D5 1785 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
POLR1A-208ENST00000486964 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
POLR1A-208ENST00000486964 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
POLR1A-208ENST00000486964 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-208ENST00000486964 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-208ENST00000486964 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
POLR1A-208ENST00000486964 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
POLR1A-208ENST00000486964 CSF1RP07333 972 aa11.73□□□□□ -0.53
POLR1A-208ENST00000486964 MRE11P49959 708 aa11.73□□□□□ -0.53
POLR1A-208ENST00000486964 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
POLR1A-208ENST00000486964 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
POLR1A-208ENST00000486964 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
POLR1A-208ENST00000486964 TRAK2O60296 914 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 CDC45O75419 566 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 DDIT3P35638 169 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 PDE1AP54750 535 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 PTPN12Q05209 780 aaKnown RBP11.72□□□□□ -0.53
POLR1A-208ENST00000486964 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
POLR1A-208ENST00000486964 SASH1O94885 1247 aa11.71□□□□□ -0.53
POLR1A-208ENST00000486964 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
POLR1A-208ENST00000486964 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
POLR1A-208ENST00000486964 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
POLR1A-208ENST00000486964 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
POLR1A-208ENST00000486964 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 KCNQ4P56696 695 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 TTC22Q5TAA0 569 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 ERC1Q8IUD2 1116 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
POLR1A-208ENST00000486964 ZNF330Q9Y3S2 320 aaPredicted RBP11.7□□□□□ -0.54
POLR1A-208ENST00000486964 AOX1Q06278 1338 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 UBN2Q6ZU65 1347 aa11.7□□□□□ -0.54
POLR1A-208ENST00000486964 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
POLR1A-208ENST00000486964 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
POLR1A-208ENST00000486964 APBB1O00213 710 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 HSP90AA1P07900 732 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms