RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
APTX-228ENST00000486724 RBBP6Q7Z6E9 1792 aaKnown RBP11.53□□□□□ -0.56
APTX-228ENST00000486724 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
APTX-228ENST00000486724 LARGE2Q8N3Y3 721 aa11.52□□□□□ -0.57
APTX-228ENST00000486724 ZNF296Q8WUU4 475 aaPredicted RBP11.52□□□□□ -0.57
APTX-228ENST00000486724 CSRNP1Q96S65 589 aa11.52□□□□□ -0.57
APTX-228ENST00000486724 MRC1P22897 1456 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
APTX-228ENST00000486724 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 STARD3NLO95772 234 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 ALDH1B1P30837 517 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 SLC52A2Q9HAB3 445 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 CDHR2Q9BYE9 1310 aa11.51□□□□□ -0.57
APTX-228ENST00000486724 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 UBR2Q8IWV8 1755 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 SLC10A3P09131 477 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 CC2D2BQ6DHV5 1058 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
APTX-228ENST00000486724 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 TESK2Q96S53 571 aa11.5□□□□□ -0.57
APTX-228ENST00000486724 GBA2Q9HCG7 927 aaPredicted RBP11.5□□□□□ -0.57
APTX-228ENST00000486724 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
APTX-228ENST00000486724 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
APTX-228ENST00000486724 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
APTX-228ENST00000486724 SLC39A6Q13433 755 aa11.49□□□□□ -0.57
APTX-228ENST00000486724 INTS3Q68E01 1043 aaKnown RBP11.49□□□□□ -0.57
APTX-228ENST00000486724 GMPSP49915 693 aaPredicted RBP11.48□□□□□ -0.57
APTX-228ENST00000486724 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
APTX-228ENST00000486724 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
APTX-228ENST00000486724 USP48Q86UV5 1035 aa11.48□□□□□ -0.57
APTX-228ENST00000486724 POLKQ9UBT6 870 aa11.48□□□□□ -0.57
APTX-228ENST00000486724 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
APTX-228ENST00000486724 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
APTX-228ENST00000486724 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
APTX-228ENST00000486724 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
APTX-228ENST00000486724 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
APTX-228ENST00000486724 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
APTX-228ENST00000486724 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
APTX-228ENST00000486724 CEP290O15078 2479 aa11.46□□□□□ -0.57
APTX-228ENST00000486724 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
APTX-228ENST00000486724 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.57
APTX-228ENST00000486724 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
APTX-228ENST00000486724 PPIP5K2O43314 1243 aa11.45□□□□□ -0.58
APTX-228ENST00000486724 TBC1D8O95759 1140 aa11.45□□□□□ -0.58
APTX-228ENST00000486724 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
APTX-228ENST00000486724 KRT26Q7Z3Y9 468 aa11.45□□□□□ -0.58
APTX-228ENST00000486724 GPR25O00155 361 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 CXCL9Q07325 125 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 DLK2Q6UY11 383 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 RASAL3Q86YV0 1011 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 BCL2L13Q9BXK5 485 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 ZNRF3Q9ULT6 936 aa11.44□□□□□ -0.58
APTX-228ENST00000486724 H0YGN5 161 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
APTX-228ENST00000486724 CLEC4GQ6UXB4 293 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
APTX-228ENST00000486724 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
APTX-228ENST00000486724 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 ZNF652Q9Y2D9 606 aa11.43□□□□□ -0.58
APTX-228ENST00000486724 FKTNO75072 461 aa11.42□□□□□ -0.58
APTX-228ENST00000486724 AOC3Q16853 763 aa11.42□□□□□ -0.58
APTX-228ENST00000486724 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
APTX-228ENST00000486724 VPS33BQ9H267 617 aa11.42□□□□□ -0.58
APTX-228ENST00000486724 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
APTX-228ENST00000486724 ADM5C9JUS6 153 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 H7C1D1 291 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
APTX-228ENST00000486724 EN2P19622 333 aaPredicted RBP11.41□□□□□ -0.58
APTX-228ENST00000486724 TNIP1Q15025 636 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 CRY2Q49AN0 593 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 CNOT7Q9UIV1 285 aaKnown RBP11.41□□□□□ -0.58
APTX-228ENST00000486724 KIAA0100Q14667 2235 aaKnown RBP11.41□□□□□ -0.58
APTX-228ENST00000486724 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
APTX-228ENST00000486724 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
APTX-228ENST00000486724 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
APTX-228ENST00000486724 GTF2E1P29083 439 aaPredicted RBP11.39□□□□□ -0.59
APTX-228ENST00000486724 TNNT2P45379 298 aaPredicted RBP11.39□□□□□ -0.59
APTX-228ENST00000486724 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
APTX-228ENST00000486724 SULT6B1Q6IMI4 303 aa11.39□□□□□ -0.59
APTX-228ENST00000486724 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
APTX-228ENST00000486724 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
APTX-228ENST00000486724 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
APTX-228ENST00000486724 TRIM17Q9Y577 477 aa11.39□□□□□ -0.59
APTX-228ENST00000486724 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 VCANP13611 3396 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
APTX-228ENST00000486724 RAD17O75943 681 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 A1BGP04217 495 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
APTX-228ENST00000486724 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms