RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 DLK2Q6UY11 383 aa18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 ZC3H15Q8WU90 426 aaKnown RBP18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 GBA2Q9HCG7 927 aaPredicted RBP18.67■□□□□ 0.58
TSC22D3-208ENST00000486554 SZT2Q5T011 3432 aa18.66■□□□□ 0.58
TSC22D3-208ENST00000486554 KLRG2A4D1S0 409 aaPredicted RBP18.66■□□□□ 0.58
TSC22D3-208ENST00000486554 GMPSP49915 693 aaPredicted RBP18.66■□□□□ 0.58
TSC22D3-208ENST00000486554 C2orf69Q8N8R5 385 aa18.66■□□□□ 0.58
TSC22D3-208ENST00000486554 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
TSC22D3-208ENST00000486554 MRC1P22897 1456 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 SLC10A3P09131 477 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 TRPM4Q8TD43 1214 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
TSC22D3-208ENST00000486554 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.57
TSC22D3-208ENST00000486554 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
TSC22D3-208ENST00000486554 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
TSC22D3-208ENST00000486554 CUL9Q8IWT3 2517 aa18.63■□□□□ 0.57
TSC22D3-208ENST00000486554 TRIOBPQ9H2D6 2365 aa18.62■□□□□ 0.57
TSC22D3-208ENST00000486554 TBC1D8O95759 1140 aa18.62■□□□□ 0.57
TSC22D3-208ENST00000486554 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
TSC22D3-208ENST00000486554 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
TSC22D3-208ENST00000486554 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
TSC22D3-208ENST00000486554 RNMTO43148 476 aaKnown RBP18.61■□□□□ 0.57
TSC22D3-208ENST00000486554 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
TSC22D3-208ENST00000486554 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
TSC22D3-208ENST00000486554 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 CXCL9Q07325 125 aa18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 AOC3Q16853 763 aa18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 TPTE2Q6XPS3 522 aa18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 REM2Q8IYK8 340 aaPredicted RBP18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
TSC22D3-208ENST00000486554 CDHR2Q9BYE9 1310 aa18.59■□□□□ 0.57
TSC22D3-208ENST00000486554 KRT26Q7Z3Y9 468 aa18.59■□□□□ 0.57
TSC22D3-208ENST00000486554 PAPPA2Q9BXP8 1791 aa18.58■□□□□ 0.57
TSC22D3-208ENST00000486554 SULT6B1Q6IMI4 303 aa18.58■□□□□ 0.56
TSC22D3-208ENST00000486554 PITPNM2Q9BZ72 1349 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 GPR25O00155 361 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 A1BGP04217 495 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 MNX1P50219 401 aaPredicted RBP18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 GRIPAP1Q4V328 841 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 RASAL3Q86YV0 1011 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
TSC22D3-208ENST00000486554 SHTN1A0MZ66 631 aa18.56■□□□□ 0.56
TSC22D3-208ENST00000486554 ADM5C9JUS6 153 aa18.56■□□□□ 0.56
TSC22D3-208ENST00000486554 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
TSC22D3-208ENST00000486554 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
TSC22D3-208ENST00000486554 ZNF652Q9Y2D9 606 aa18.56■□□□□ 0.56
TSC22D3-208ENST00000486554 A0A0C4DFX4 3053 aa18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 CNOT7Q9UIV1 285 aaKnown RBP18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
TSC22D3-208ENST00000486554 H7C1D1 291 aa18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 EN2P19622 333 aaPredicted RBP18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 OTUD5Q96G74 571 aa18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 RBBP6Q7Z6E9 1792 aaKnown RBP18.54■□□□□ 0.56
TSC22D3-208ENST00000486554 H0YGN5 161 aa18.53■□□□□ 0.56
TSC22D3-208ENST00000486554 RAD17O75943 681 aa18.53■□□□□ 0.56
TSC22D3-208ENST00000486554 CHRDL2Q6WN34 429 aa18.53■□□□□ 0.56
TSC22D3-208ENST00000486554 MICALL2Q8IY33 904 aa18.53■□□□□ 0.56
TSC22D3-208ENST00000486554 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
TSC22D3-208ENST00000486554 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
TSC22D3-208ENST00000486554 FKTNO75072 461 aa18.52■□□□□ 0.56
TSC22D3-208ENST00000486554 CRY2Q49AN0 593 aa18.52■□□□□ 0.56
TSC22D3-208ENST00000486554 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
TSC22D3-208ENST00000486554 TNIP1Q15025 636 aa18.51■□□□□ 0.55
TSC22D3-208ENST00000486554 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
TSC22D3-208ENST00000486554 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
TSC22D3-208ENST00000486554 COL6A3P12111 3177 aa18.5■□□□□ 0.55
TSC22D3-208ENST00000486554 SAMD7Q7Z3H4 446 aa18.5■□□□□ 0.55
TSC22D3-208ENST00000486554 KIAA0100Q14667 2235 aaKnown RBP18.49■□□□□ 0.55
TSC22D3-208ENST00000486554 TBC1D10BQ4KMP7 808 aaPredicted RBP18.49■□□□□ 0.55
TSC22D3-208ENST00000486554 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
TSC22D3-208ENST00000486554 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
TSC22D3-208ENST00000486554 ABCC12Q96J65 1359 aa18.49■□□□□ 0.55
TSC22D3-208ENST00000486554 POLR2AP24928 1970 aaKnown RBP18.48■□□□□ 0.55
TSC22D3-208ENST00000486554 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
TSC22D3-208ENST00000486554 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
TSC22D3-208ENST00000486554 ZNF790Q6PG37 636 aa18.47■□□□□ 0.55
TSC22D3-208ENST00000486554 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
TSC22D3-208ENST00000486554 HTTP42858 3142 aa18.46■□□□□ 0.55
TSC22D3-208ENST00000486554 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.55
TSC22D3-208ENST00000486554 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
TSC22D3-208ENST00000486554 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.55
TSC22D3-208ENST00000486554 CEP290O15078 2479 aa18.46■□□□□ 0.55
TSC22D3-208ENST00000486554 EGFRP00533 1210 aa18.45■□□□□ 0.54
TSC22D3-208ENST00000486554 HOXA10P31260 410 aaPredicted RBP18.45■□□□□ 0.54
TSC22D3-208ENST00000486554 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSC22D3-208ENST00000486554 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
TSC22D3-208ENST00000486554 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
TSC22D3-208ENST00000486554 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms