RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 NLRP10Q86W26 655 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 CHD1LQ86WJ1 897 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 EXOC6BQ9Y2D4 811 aa17.96■□□□□ 0.47
COL9A1-207ENST00000486080 SLC27A3Q5K4L6 730 aa17.95■□□□□ 0.46
COL9A1-207ENST00000486080 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
COL9A1-207ENST00000486080 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
COL9A1-207ENST00000486080 TXNRD1Q16881 649 aa17.95■□□□□ 0.46
COL9A1-207ENST00000486080 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
COL9A1-207ENST00000486080 RTCBQ9Y3I0 505 aaKnown RBP17.94■□□□□ 0.46
COL9A1-207ENST00000486080 PLSCR1O15162 318 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 SMARCA5O60264 1052 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-207ENST00000486080 UBR3Q6ZT12 1888 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 SYNE4Q8N205 404 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 AK7Q96M32 723 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-207ENST00000486080 FOXO4P98177 505 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
COL9A1-207ENST00000486080 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
COL9A1-207ENST00000486080 PHF14O94880 888 aa17.92■□□□□ 0.46
COL9A1-207ENST00000486080 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-207ENST00000486080 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
COL9A1-207ENST00000486080 SURF6O75683 361 aaKnown RBP17.91■□□□□ 0.46
COL9A1-207ENST00000486080 RABL6Q3YEC7 729 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-207ENST00000486080 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
COL9A1-207ENST00000486080 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
COL9A1-207ENST00000486080 PA2G4Q9UQ80 394 aaKnown RBP17.91■□□□□ 0.46
COL9A1-207ENST00000486080 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
COL9A1-207ENST00000486080 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
COL9A1-207ENST00000486080 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
COL9A1-207ENST00000486080 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL9A1-207ENST00000486080 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
COL9A1-207ENST00000486080 SUSD4Q5VX71 490 aa17.9■□□□□ 0.46
COL9A1-207ENST00000486080 CLEC4GQ6UXB4 293 aa17.9■□□□□ 0.46
COL9A1-207ENST00000486080 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-207ENST00000486080 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
COL9A1-207ENST00000486080 TRAPPC3LQ5T215 181 aa17.89■□□□□ 0.45
COL9A1-207ENST00000486080 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.45
COL9A1-207ENST00000486080 ZPR1O75312 459 aa17.88■□□□□ 0.45
COL9A1-207ENST00000486080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
COL9A1-207ENST00000486080 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-207ENST00000486080 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
COL9A1-207ENST00000486080 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-207ENST00000486080 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
COL9A1-207ENST00000486080 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
COL9A1-207ENST00000486080 MYH3P11055 1940 aa17.88■□□□□ 0.45
COL9A1-207ENST00000486080 RFC4P35249 363 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-207ENST00000486080 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
COL9A1-207ENST00000486080 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 RGPD3A6NKT7 1758 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-207ENST00000486080 RGPD4Q7Z3J3 1758 aa17.87■□□□□ 0.45
COL9A1-207ENST00000486080 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
COL9A1-207ENST00000486080 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
COL9A1-207ENST00000486080 RGL2O15211 777 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 RAB11FIP3O75154 756 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 SIL1Q9H173 461 aa17.86■□□□□ 0.45
COL9A1-207ENST00000486080 NTSR2O95665 410 aa17.85■□□□□ 0.45
COL9A1-207ENST00000486080 ADRA2BP18089 450 aa17.85■□□□□ 0.45
COL9A1-207ENST00000486080 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-207ENST00000486080 CCDC85AQ96PX6 553 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-207ENST00000486080 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
COL9A1-207ENST00000486080 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
COL9A1-207ENST00000486080 TUBGCP6Q96RT7 1819 aa17.85■□□□□ 0.45
COL9A1-207ENST00000486080 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
COL9A1-207ENST00000486080 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
COL9A1-207ENST00000486080 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 PLEKHM2Q8IWE5 1019 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 HCLS1P14317 486 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-207ENST00000486080 SSFA2P28290 1259 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-207ENST00000486080 HSP90AB4PQ58FF6 505 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 COPRSQ9NQ92 184 aa17.84■□□□□ 0.45
COL9A1-207ENST00000486080 CSF1RP07333 972 aa17.83■□□□□ 0.44
COL9A1-207ENST00000486080 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL9A1-207ENST00000486080 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
COL9A1-207ENST00000486080 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.44
COL9A1-207ENST00000486080 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.44
COL9A1-207ENST00000486080 CTSWP56202 376 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-207ENST00000486080 CAMKK2Q96RR4 588 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-207ENST00000486080 PDE8AO60658 829 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 SASH1O94885 1247 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 LAMB2P55268 1798 aa17.82■□□□□ 0.44
COL9A1-207ENST00000486080 HMGB2P26583 209 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms