RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 UTYO14607 1347 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 MAP3K15Q6ZN16 1313 aa11.83□□□□□ -0.52
CTSA-208ENST00000485627 SBF2Q86WG5 1849 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 ITPK1Q13572 414 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 DZIP3Q86Y13 1208 aaKnown RBP11.82□□□□□ -0.52
CTSA-208ENST00000485627 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
CTSA-208ENST00000485627 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 APBB1O00213 710 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
CTSA-208ENST00000485627 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
CTSA-208ENST00000485627 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
CTSA-208ENST00000485627 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
CTSA-208ENST00000485627 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
CTSA-208ENST00000485627 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
CTSA-208ENST00000485627 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
CTSA-208ENST00000485627 PDE4AP27815 886 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 EIF5P55010 431 aaKnown RBP11.8□□□□□ -0.52
CTSA-208ENST00000485627 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
CTSA-208ENST00000485627 MTX1Q13505 466 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
CTSA-208ENST00000485627 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 CHD4Q14839 1912 aa11.8□□□□□ -0.52
CTSA-208ENST00000485627 NHSQ6T4R5 1651 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
CTSA-208ENST00000485627 GPR162Q16538 588 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 LINC00116Q8NCU8 138 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 TJP1Q07157 1748 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
CTSA-208ENST00000485627 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
CTSA-208ENST00000485627 H7C1W4 665 aa11.78□□□□□ -0.52
CTSA-208ENST00000485627 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
CTSA-208ENST00000485627 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
CTSA-208ENST00000485627 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
CTSA-208ENST00000485627 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
CTSA-208ENST00000485627 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
CTSA-208ENST00000485627 COL15A1P39059 1388 aa11.78□□□□□ -0.52
CTSA-208ENST00000485627 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
CTSA-208ENST00000485627 PCCAP05165 728 aaPredicted RBP11.77□□□□□ -0.53
CTSA-208ENST00000485627 GPTP24298 496 aa11.77□□□□□ -0.53
CTSA-208ENST00000485627 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTSA-208ENST00000485627 HLFQ16534 295 aa11.77□□□□□ -0.53
CTSA-208ENST00000485627 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
CTSA-208ENST00000485627 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
CTSA-208ENST00000485627 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
CTSA-208ENST00000485627 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
CTSA-208ENST00000485627 KCNQ4P56696 695 aa11.76□□□□□ -0.53
CTSA-208ENST00000485627 ZNF827Q17R98 1081 aa11.76□□□□□ -0.53
CTSA-208ENST00000485627 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
CTSA-208ENST00000485627 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
CTSA-208ENST00000485627 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
CTSA-208ENST00000485627 BTAF1O14981 1849 aa11.76□□□□□ -0.53
CTSA-208ENST00000485627 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
CTSA-208ENST00000485627 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 GNPATO15228 680 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 CASP7P55210 303 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 PARP10Q53GL7 1025 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 NLGN2Q8NFZ4 835 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 KAZALD1Q96I82 304 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 AK7Q96M32 723 aa11.75□□□□□ -0.53
CTSA-208ENST00000485627 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
CTSA-208ENST00000485627 NOP58Q9Y2X3 529 aaKnown RBP11.75□□□□□ -0.53
CTSA-208ENST00000485627 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
CTSA-208ENST00000485627 ZPR1O75312 459 aa11.74□□□□□ -0.53
CTSA-208ENST00000485627 HSP90B1P14625 803 aaKnown RBP11.74□□□□□ -0.53
CTSA-208ENST00000485627 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
CTSA-208ENST00000485627 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
CTSA-208ENST00000485627 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
CTSA-208ENST00000485627 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
CTSA-208ENST00000485627 ZNF34Q8IZ26 560 aa11.74□□□□□ -0.53
CTSA-208ENST00000485627 GOLGB1Q14789 3259 aaKnown RBP11.73□□□□□ -0.53
CTSA-208ENST00000485627 RGL2O15211 777 aa11.73□□□□□ -0.53
CTSA-208ENST00000485627 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
CTSA-208ENST00000485627 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
CTSA-208ENST00000485627 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
CTSA-208ENST00000485627 UTP14AQ9BVJ6 771 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms