RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CCDC170Q8IYT3 715 aa11.72□□□□□ -0.53
COL12A1-207ENST00000483888 TEFQ10587 303 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 IFT81Q8WYA0 676 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.53
COL12A1-207ENST00000483888 NUCKS1Q9H1E3 243 aaKnown RBP11.71□□□□□ -0.53
COL12A1-207ENST00000483888 VAV2P52735 878 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 NEDD9Q14511 834 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 MUM1Q2TAK8 710 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 RBSNQ9H1K0 784 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL12A1-207ENST00000483888 LIMCH1Q9UPQ0 1083 aa11.71□□□□□ -0.53
COL12A1-207ENST00000483888 SMIM23A6NLE4 172 aa11.71□□□□□ -0.54
COL12A1-207ENST00000483888 CCDC88BA6NC98 1476 aa11.71□□□□□ -0.54
COL12A1-207ENST00000483888 TYRO3Q06418 890 aa11.71□□□□□ -0.54
COL12A1-207ENST00000483888 JPH2Q9BR39 696 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-207ENST00000483888 IKBKGQ9Y6K9 419 aa11.71□□□□□ -0.54
COL12A1-207ENST00000483888 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.54
COL12A1-207ENST00000483888 MACROD2A1Z1Q3 448 aa11.71□□□□□ -0.54
COL12A1-207ENST00000483888 HMOX1P09601 288 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
COL12A1-207ENST00000483888 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 PSMC4P43686 418 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 ICE2Q659A1 982 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 SLC24A3Q9HC58 644 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-207ENST00000483888 FERP16591 822 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
COL12A1-207ENST00000483888 TBC1D31Q96DN5 1066 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 DNAJC25Q9H1X3 360 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 PHLDB2Q86SQ0 1253 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 COG3Q96JB2 828 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 LZTFL1Q9NQ48 299 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 FGFR1OPO95684 399 aaKnown RBP11.7□□□□□ -0.54
COL12A1-207ENST00000483888 RASAL2Q9UJF2 1139 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 TBC1D9Q6ZT07 1266 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
COL12A1-207ENST00000483888 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 UBLCP1Q8WVY7 318 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 ABTB1Q969K4 478 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 CCDC57Q2TAC2 916 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 GSDMBQ8TAX9 411 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 DDX12PQ92771 950 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 TPD52P55327 224 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 RASEFQ8IZ41 740 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 STK38LQ9Y2H1 464 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-207ENST00000483888 E7EVH7 732 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 TSG101Q99816 390 aa11.69□□□□□ -0.54
COL12A1-207ENST00000483888 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 KCNK9Q9NPC2 374 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 ZNF500O60304 480 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 PPP2R1AP30153 589 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 CABS1Q96KC9 395 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 IQCGQ9H095 443 aaKnown RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 GOLGA6BA6NDN3 693 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 WASF1Q92558 559 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 MYO1BO43795 1136 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 SECISBP2LQ93073 1101 aaKnown RBP11.68□□□□□ -0.54
COL12A1-207ENST00000483888 OPHN1O60890 802 aa11.68□□□□□ -0.54
COL12A1-207ENST00000483888 TXNDC9O14530 226 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 C8orf76Q96K31 380 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 SCAPERQ9BY12 1400 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 CEP104O60308 925 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 CCDC92Q53HC0 331 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 MTIF2P46199 727 aaKnown RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 TMED1Q13445 227 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 CARD6Q9BX69 1037 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 UTP14AQ9BVJ6 771 aaKnown RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 C8orf34Q49A92 452 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 RASIP1Q5U651 963 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
COL12A1-207ENST00000483888 RAB3IPQ96QF0 476 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-207ENST00000483888 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
COL12A1-207ENST00000483888 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms