RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SASH1O94885 1247 aa10.88□□□□□ -0.67
CDC42SE1-204ENST00000483763 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 VSIG10Q8N0Z9 540 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 PI4K2BQ8TCG2 481 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 SIL1Q9H173 461 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 ARFGEF2Q9Y6D5 1785 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 MAP4K4O95819 1239 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 OS9Q13438 667 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 NBR1Q14596 966 aa10.87□□□□□ -0.67
CDC42SE1-204ENST00000483763 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-204ENST00000483763 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-204ENST00000483763 H7C1W4 665 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 RFX5P48382 616 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 RABL6Q3YEC7 729 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 RILPL2Q969X0 211 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 USP26Q9BXU7 913 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 KCNQ2O43526 872 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 STARD3NLO95772 234 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 IL25Q9H293 177 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 ZBTB1Q9Y2K1 713 aa10.85□□□□□ -0.67
CDC42SE1-204ENST00000483763 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 FOXO4P98177 505 aa10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 PTPN12Q05209 780 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 PKNOX2Q96KN3 472 aa10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 TEX13AQ9BXU3 409 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 HLFQ16534 295 aa10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 LMBR1LQ6UX01 489 aa10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 CLASRPQ8N2M8 674 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 TUBGCP6Q96RT7 1819 aa10.84□□□□□ -0.67
CDC42SE1-204ENST00000483763 CHMLP26374 656 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 CCDC191Q8NCU4 936 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 ISCA1Q9BUE6 129 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 TLR7Q9NYK1 1049 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 NUP188Q5SRE5 1749 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 DOT1LQ8TEK3 1739 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 TCIRG1Q13488 830 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 BECN1Q14457 450 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 AACSQ86V21 672 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 SYNE4Q8N205 404 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 SPRYD3Q8NCJ5 442 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 SLKQ9H2G2 1235 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 COPRSQ9NQ92 184 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 AOX1Q06278 1338 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 COL15A1P39059 1388 aa10.83□□□□□ -0.68
CDC42SE1-204ENST00000483763 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-204ENST00000483763 ERC1Q8IUD2 1116 aa10.82□□□□□ -0.68
CDC42SE1-204ENST00000483763 ANTXR1Q9H6X2 564 aa10.82□□□□□ -0.68
CDC42SE1-204ENST00000483763 ERC2O15083 957 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 KCNQ4P56696 695 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 ITPK1Q13572 414 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 CASC1Q6TDU7 716 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 FAM89AQ96GI7 184 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 GOLGB1Q14789 3259 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 MAP3K15Q6ZN16 1313 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 APBA3O96018 575 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 GPTP24298 496 aa10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-204ENST00000483763 TJP1Q07157 1748 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 TTC41PQ6P2S7 1318 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 UTRNP46939 3433 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 SIK1P57059 783 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 TFCP2Q12800 502 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 TRIM28Q13263 835 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 KIF6Q6ZMV9 814 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 ZNF594Q96JF6 807 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-204ENST00000483763 REC8O95072 547 aa10.79□□□□□ -0.68
CDC42SE1-204ENST00000483763 ATG9AQ7Z3C6 839 aa10.79□□□□□ -0.68
CDC42SE1-204ENST00000483763 SNX21Q969T3 373 aa10.79□□□□□ -0.68
CDC42SE1-204ENST00000483763 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-204ENST00000483763 DBNLQ9UJU6 430 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-204ENST00000483763 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 IL6STP40189 918 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 CRKLP46109 303 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 EIF5P55010 431 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 LRRC24Q50LG9 513 aa10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 NLRP10Q86W26 655 aa10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 PUS3Q9BZE2 481 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 ANO2Q9NQ90 1003 aa10.78□□□□□ -0.68
CDC42SE1-204ENST00000483763 PALD1Q9ULE6 856 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms