RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
CPNE1-225ENST00000483495 SIL1Q9H173 461 aa16.15■□□□□ 0.18
CPNE1-225ENST00000483495 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-225ENST00000483495 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
CPNE1-225ENST00000483495 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
CPNE1-225ENST00000483495 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
CPNE1-225ENST00000483495 IL17RAQ96F46 866 aa16.14■□□□□ 0.17
CPNE1-225ENST00000483495 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
CPNE1-225ENST00000483495 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
CPNE1-225ENST00000483495 VPS72Q15906 364 aa16.14■□□□□ 0.17
CPNE1-225ENST00000483495 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-225ENST00000483495 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-225ENST00000483495 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-225ENST00000483495 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 MAP4K4O95819 1239 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 DDIT3P35638 169 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 SGSM2O43147 1006 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 ANAPC15P60006 121 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
CPNE1-225ENST00000483495 CCDC8Q9H0W5 538 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-225ENST00000483495 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
CPNE1-225ENST00000483495 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
CPNE1-225ENST00000483495 IL25Q9H293 177 aa16.11■□□□□ 0.17
CPNE1-225ENST00000483495 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
CPNE1-225ENST00000483495 FPGT-TNNI3KV9GXZ4 949 aa16.11■□□□□ 0.17
CPNE1-225ENST00000483495 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 MCCP23508 829 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 TFCP2Q12800 502 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 ZBTB38Q8NAP3 1195 aaPredicted RBP16.1■□□□□ 0.17
CPNE1-225ENST00000483495 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 AK9Q5TCS8 1911 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 HLFQ16534 295 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 GPR108Q9NPR9 543 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
CPNE1-225ENST00000483495 CIAO1O76071 339 aa16.09■□□□□ 0.17
CPNE1-225ENST00000483495 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
CPNE1-225ENST00000483495 C8orf37Q96NL8 207 aa16.09■□□□□ 0.17
CPNE1-225ENST00000483495 RREB1Q92766 1687 aa16.09■□□□□ 0.17
CPNE1-225ENST00000483495 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 ATP5JP18859 108 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 IL15P40933 162 aaPredicted RBP16.08■□□□□ 0.17
CPNE1-225ENST00000483495 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.17
CPNE1-225ENST00000483495 SIK1P57059 783 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.17
CPNE1-225ENST00000483495 NLRP10Q86W26 655 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 IL27Q8NEV9 243 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 DBNLQ9UJU6 430 aaKnown RBP16.08■□□□□ 0.17
CPNE1-225ENST00000483495 FBXO3Q9UK99 471 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.17
CPNE1-225ENST00000483495 RAD50Q92878 1312 aa16.08■□□□□ 0.16
CPNE1-225ENST00000483495 CSF1RP07333 972 aa16.08■□□□□ 0.16
CPNE1-225ENST00000483495 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.16
CPNE1-225ENST00000483495 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-225ENST00000483495 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-225ENST00000483495 EYA2O00167 538 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 HIP1O00291 1037 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 ST18O60284 1047 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 HSPA4P34932 840 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 FAM98CQ17RN3 349 aaKnown RBP16.07■□□□□ 0.16
CPNE1-225ENST00000483495 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
CPNE1-225ENST00000483495 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
CPNE1-225ENST00000483495 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
CPNE1-225ENST00000483495 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
CPNE1-225ENST00000483495 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
CPNE1-225ENST00000483495 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
CPNE1-225ENST00000483495 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
CPNE1-225ENST00000483495 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-225ENST00000483495 CRKLP46109 303 aaKnown RBP16.05■□□□□ 0.16
CPNE1-225ENST00000483495 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
CPNE1-225ENST00000483495 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 PALD1Q9ULE6 856 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 KAT6BQ8WYB5 2073 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 ITPK1Q13572 414 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 ARXQ96QS3 562 aa16.05■□□□□ 0.16
CPNE1-225ENST00000483495 CCDC57Q2TAC2 916 aa16.04■□□□□ 0.16
CPNE1-225ENST00000483495 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
CPNE1-225ENST00000483495 RFX7Q2KHR2 1363 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 KCNQ2O43526 872 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 GPTP24298 496 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 ZNF609O15014 1411 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 NUP98P52948 1817 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 MCM2P49736 904 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms