RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	ZNF496	Q96IT1	587 aa	Predicted RBP	11.58	□□□□□ -0.56
UBE2F-222	ENST00000482096	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.58	□□□□□ -0.56
UBE2F-222	ENST00000482096	NPC1L1	Q9UHC9	1359 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	GLTPD2	A6NH11	291 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	GNAT3	A8MTJ3	354 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	TEF	Q10587	303 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	BICDL1	Q6ZP65	573 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	SMC1B	Q8NDV3	1235 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	GAS2L2	Q8NHY3	880 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	PDZRN3	Q9UPQ7	1066 aa		11.57	□□□□□ -0.56
UBE2F-222	ENST00000482096	CARMIL3	Q8ND23	1372 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	HEG1	Q9ULI3	1381 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	NFKBIE	O00221	500 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	U2SURP	O15042	1029 aa	Known RBP	11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	SBF1	O95248	1867 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	VEGFA	P15692	232 aa	Predicted RBP	11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	TBC1D9B	Q66K14	1250 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	BRIP1	Q9BX63	1249 aa		11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	COL3A1	P02461	1466 aa	Predicted RBP	11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	AFDN	P55196	1824 aa	Known RBP	11.56	□□□□□ -0.56
UBE2F-222	ENST00000482096	WDR90	Q96KV7	1748 aa		11.55	□□□□□ -0.56
UBE2F-222	ENST00000482096	IL6ST	P40189	918 aa	Predicted RBP	11.55	□□□□□ -0.56
UBE2F-222	ENST00000482096	OXER1	Q8TDS5	423 aa		11.55	□□□□□ -0.56
UBE2F-222	ENST00000482096	TBC1D2B	Q9UPU7	963 aa		11.55	□□□□□ -0.56
UBE2F-222	ENST00000482096	UBR2	Q8IWV8	1755 aa		11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	HOXB3	P14651	431 aa	Predicted RBP	11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	PDE6B	P35913	854 aa		11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	PRR5L	Q6MZQ0	368 aa		11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	FMNL2	Q96PY5	1086 aa		11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	CEMIP	Q8WUJ3	1361 aa		11.54	□□□□□ -0.56
UBE2F-222	ENST00000482096	POTEC	B2RU33	542 aa		11.53	□□□□□ -0.56
UBE2F-222	ENST00000482096	A1BG	P04217	495 aa		11.53	□□□□□ -0.56
UBE2F-222	ENST00000482096	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.53	□□□□□ -0.56
UBE2F-222	ENST00000482096	DLEC1	Q9Y238	1755 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	C21orf2	O43822	256 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	CAMTA2	O94983	1202 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	SLC34A2	O95436	690 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	MAP3K9	P80192	1104 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	DOK7	Q18PE1	504 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	NPM2	Q86SE8	214 aa	Known RBP	11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	CCDC24	Q8N4L8	307 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	PHACTR3	Q96KR7	559 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	SETDB2	Q96T68	719 aa		11.52	□□□□□ -0.57
UBE2F-222	ENST00000482096	VIRMA	Q69YN4	1812 aa	Known RBP	11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	BTBD11	A6QL63	1104 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	KCNQ3	O43525	872 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	CNGB1	Q14028	1251 aa	Predicted RBP	11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	ERFE	Q4G0M1	354 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	CNBD1	Q8NA66	436 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	PTCD2	Q8WV60	388 aa	Known RBP	11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	CNKSR1	Q969H4	720 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	RSPH6A	Q9H0K4	717 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	LTBP3	Q9NS15	1303 aa		11.51	□□□□□ -0.57
UBE2F-222	ENST00000482096	SEMA3E	O15041	775 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	SRGN	P10124	158 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	PRKAR2B	P31323	418 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	STYK1	Q6J9G0	422 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	DZIP3	Q86Y13	1208 aa	Known RBP	11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	PCDHGA4	Q9Y5G9	962 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	USP16	Q9Y5T5	823 aa		11.5	□□□□□ -0.57
UBE2F-222	ENST00000482096	ST5	P78524	1137 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	CLEC4G	Q6UXB4	293 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	MASTL	Q96GX5	879 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	CFAP53	Q96M91	514 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	TAOK3	Q9H2K8	898 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	SCN7A	Q01118	1682 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	ANKRD31	Q8N7Z5	1873 aa		11.49	□□□□□ -0.57
UBE2F-222	ENST00000482096	NPHP1	O15259	732 aa		11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	SNRPA1	P09661	255 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	PDIA6	Q15084	440 aa		11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	SOGA3	Q5TF21	947 aa		11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	PRPF40B	Q6NWY9	871 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	NUDC	Q9Y266	331 aa		11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	SIPA1L3	O60292	1781 aa	Predicted RBP	11.48	□□□□□ -0.57
UBE2F-222	ENST00000482096	PRAMEF22	A3QJZ6	481 aa		11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	DDN	O94850	711 aa	Predicted RBP	11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	PIP4K2A	P48426	406 aa	Predicted RBP	11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	ZNF710	Q8N1W2	664 aa		11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	C7orf43	Q8WVR3	580 aa		11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	RTF1	Q92541	710 aa	Known RBP	11.47	□□□□□ -0.57
UBE2F-222	ENST00000482096	TIAM2	Q8IVF5	1701 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	KLRG2	A4D1S0	409 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	RIMBP2	O15034	1052 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	SNPH	O15079	494 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	HTATSF1	O43719	755 aa	Known RBP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	TBC1D12	O60347	775 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	MCM10	Q7L590	875 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	ZNF652	Q9Y2D9	606 aa		11.46	□□□□□ -0.57
UBE2F-222	ENST00000482096	FER1L6	Q2WGJ9	1857 aa		11.46	□□□□□ -0.58
UBE2F-222	ENST00000482096	COL11A2	P13942	1736 aa	Predicted RBP	11.46	□□□□□ -0.58
UBE2F-222	ENST00000482096	CCDC88A	Q3V6T2	1871 aa		11.45	□□□□□ -0.58
UBE2F-222	ENST00000482096	NBPF26	B4DH59	902 aa		11.45	□□□□□ -0.58

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