RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
GGPS1-205ENST00000482013 RFX5P48382 616 aaPredicted RBP14.36□□□□□ -0.11
GGPS1-205ENST00000482013 EPHA10Q5JZY3 1008 aa14.36□□□□□ -0.11
GGPS1-205ENST00000482013 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
GGPS1-205ENST00000482013 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
GGPS1-205ENST00000482013 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
GGPS1-205ENST00000482013 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
GGPS1-205ENST00000482013 ERC2O15083 957 aa14.35□□□□□ -0.11
GGPS1-205ENST00000482013 MSH5O43196 834 aa14.35□□□□□ -0.11
GGPS1-205ENST00000482013 RBM25P49756 843 aaKnown RBP14.35□□□□□ -0.11
GGPS1-205ENST00000482013 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
GGPS1-205ENST00000482013 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
GGPS1-205ENST00000482013 ZBTB38Q8NAP3 1195 aaPredicted RBP14.35□□□□□ -0.11
GGPS1-205ENST00000482013 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
GGPS1-205ENST00000482013 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
GGPS1-205ENST00000482013 SBF2Q86WG5 1849 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 A0A0G2JS52 829 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 KCNQ2O43526 872 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 MYT1Q01538 1121 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 PTPN12Q05209 780 aaKnown RBP14.34□□□□□ -0.11
GGPS1-205ENST00000482013 RC3H1Q5TC82 1133 aaKnown RBP14.34□□□□□ -0.11
GGPS1-205ENST00000482013 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 PA2G4Q9UQ80 394 aaKnown RBP14.34□□□□□ -0.11
GGPS1-205ENST00000482013 ZNF330Q9Y3S2 320 aaPredicted RBP14.34□□□□□ -0.11
GGPS1-205ENST00000482013 BTAF1O14981 1849 aa14.34□□□□□ -0.11
GGPS1-205ENST00000482013 AK9Q5TCS8 1911 aa14.33□□□□□ -0.11
GGPS1-205ENST00000482013 MYH14Q7Z406 1995 aaKnown RBP14.33□□□□□ -0.12
GGPS1-205ENST00000482013 GLRX3O76003 335 aaKnown RBP14.33□□□□□ -0.12
GGPS1-205ENST00000482013 SASH1O94885 1247 aa14.33□□□□□ -0.12
GGPS1-205ENST00000482013 IFIT2P09913 472 aaKnown RBP14.33□□□□□ -0.12
GGPS1-205ENST00000482013 ITPK1Q13572 414 aa14.33□□□□□ -0.12
GGPS1-205ENST00000482013 ZNF34Q8IZ26 560 aa14.33□□□□□ -0.12
GGPS1-205ENST00000482013 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
GGPS1-205ENST00000482013 EPB41L2O43491 1005 aaKnown RBP14.32□□□□□ -0.12
GGPS1-205ENST00000482013 BECN1Q14457 450 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 NUTM1Q86Y26 1132 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 PI4K2BQ8TCG2 481 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 AK7Q96M32 723 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 QTRT2Q9H974 415 aaKnown RBP14.32□□□□□ -0.12
GGPS1-205ENST00000482013 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 ECHDC1Q9NTX5 307 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
GGPS1-205ENST00000482013 MYH3P11055 1940 aa14.32□□□□□ -0.12
GGPS1-205ENST00000482013 CIAO1O76071 339 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 REC8O95072 547 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 CSF1RP07333 972 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 HSP90B1P14625 803 aaKnown RBP14.31□□□□□ -0.12
GGPS1-205ENST00000482013 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
GGPS1-205ENST00000482013 HLFQ16534 295 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 ARXQ96QS3 562 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 LY75O60449 1722 aa14.31□□□□□ -0.12
GGPS1-205ENST00000482013 BCORQ6W2J9 1755 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 SEPT12Q8IYM1 358 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 JARID2Q92833 1246 aaPredicted RBP14.3□□□□□ -0.12
GGPS1-205ENST00000482013 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
GGPS1-205ENST00000482013 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
GGPS1-205ENST00000482013 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-205ENST00000482013 AACSQ86V21 672 aa14.29□□□□□ -0.12
GGPS1-205ENST00000482013 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-205ENST00000482013 TBC1D2BQ9UPU7 963 aa14.29□□□□□ -0.12
GGPS1-205ENST00000482013 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
GGPS1-205ENST00000482013 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 PDE8AO60658 829 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 KCNA4P22459 653 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 CHMLP26374 656 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 TICAM2Q86XR7 235 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 IL27Q8NEV9 243 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 USP26Q9BXU7 913 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 SIL1Q9H173 461 aa14.28□□□□□ -0.12
GGPS1-205ENST00000482013 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.12
GGPS1-205ENST00000482013 EYA2O00167 538 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 RPS6KA4O75676 772 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 TNNI3KQ59H18 835 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 FAM89AQ96GI7 184 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.13
GGPS1-205ENST00000482013 TRMT112Q9UI30 125 aaKnown RBP14.27□□□□□ -0.13
GGPS1-205ENST00000482013 FPGT-TNNI3KV9GXZ4 949 aa14.27□□□□□ -0.13
GGPS1-205ENST00000482013 GPTP24298 496 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 TSHZ3Q63HK5 1081 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 ESYT1Q9BSJ8 1104 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 UTP14AQ9BVJ6 771 aaKnown RBP14.26□□□□□ -0.13
GGPS1-205ENST00000482013 CHMP3Q9Y3E7 222 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 LAMB2P55268 1798 aa14.26□□□□□ -0.13
GGPS1-205ENST00000482013 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 HIP1O00291 1037 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
GGPS1-205ENST00000482013 ATP5JP18859 108 aa14.25□□□□□ -0.13
GGPS1-205ENST00000482013 CTSWP56202 376 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms