RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 CRKLP46109 303 aaKnown RBP3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 NPM2Q86SE8 214 aaKnown RBP3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 ZNF34Q8IZ26 560 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 ARXQ96QS3 562 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 CRAMP1Q96RY5 1269 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 MBIPQ9NS73 344 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 METRNQ9UJH8 293 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 TRIM37O94972 964 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 CAMTA2O94983 1202 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 PCCAP05165 728 aaPredicted RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 FKBP1AP62942 108 aaKnown RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 MTX1Q13505 466 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 GSE1Q14687 1217 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 CHADLQ6NUI6 762 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 KSR2Q6VAB6 950 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 NFATC2IPQ8NCF5 419 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 LINC00116Q8NCU8 138 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 SUPT20HQ8NEM7 779 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 DDX54Q8TDD1 881 aaKnown RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 APAF1O14727 1248 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 VAMP4O75379 141 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 ST5P78524 1137 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 SF3B3Q15393 1217 aaKnown RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 CRY2Q49AN0 593 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 DUSP27Q5VZP5 1158 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 INTS3Q68E01 1043 aaKnown RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 SPNS2Q8IVW8 549 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 USHBP1Q8N6Y0 703 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 LINS1Q8NG48 757 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 ZNF496Q96IT1 587 aaPredicted RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 BRIP1Q9BX63 1249 aa3.46□□□□□ -1.86
RAB3IP-206ENST00000481897 A0A0G2JS52 829 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 GRIN3BO60391 1043 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 ZPR1O75312 459 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 MYT1Q01538 1121 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 NEXNQ0ZGT2 675 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 TCIRG1Q13488 830 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 ITPK1Q13572 414 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 PDIA6Q15084 440 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 TWISTNBQ3B726 338 aaPredicted RBP3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 HDGFL1Q5TGJ6 251 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 MPRIPQ6WCQ1 1025 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 CERS3Q8IU89 383 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 RFX7Q2KHR2 1363 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 COL2A1P02458 1487 aaPredicted RBP3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 DOCK2Q92608 1830 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 ZBTB7CA1YPR0 619 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 GNAI3P08754 354 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 ALDH1B1P30837 517 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 TNNT2P45379 298 aaPredicted RBP3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 CNKSR1Q969H4 720 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 LGR6Q9HBX8 967 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 THSD7BQ9C0I4 1608 aa3.45□□□□□ -1.86
RAB3IP-206ENST00000481897 GYS1P13807 737 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 NPR1P16066 1061 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 RFC4P35249 363 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 RABL6Q3YEC7 729 aaPredicted RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 MRPL50Q8N5N7 158 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 CDC5LQ99459 802 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 RTFDC1Q9BY42 306 aaPredicted RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 GPR108Q9NPR9 543 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 ASAP1Q9ULH1 1129 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 PARP3Q9Y6F1 533 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 ADCY9O60503 1353 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 ADAMTSL1Q8N6G6 1762 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 SBF1O95248 1867 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 MYH13Q9UKX3 1938 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 SOX12O15370 315 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 CIAO1O76071 339 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 EZH2Q15910 746 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 TPTE2Q6XPS3 522 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 DZIP3Q86Y13 1208 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 DNAJC10Q8IXB1 793 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 ZBTB38Q8NAP3 1195 aaPredicted RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 SLC4A9Q96Q91 983 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 PSMD1Q99460 953 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 PODXL2Q9NZ53 605 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 UNCXA6NJT0 531 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 POLRMTO00411 1230 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 BBOX1O75936 387 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 HSP90AB4PQ58FF6 505 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 RTN4Q9NQC3 1192 aaKnown RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 LRRC4BQ9NT99 713 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 CWC25Q9NXE8 425 aaPredicted RBP3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 SUGT1Q9Y2Z0 365 aa3.44□□□□□ -1.86
RAB3IP-206ENST00000481897 SH3TC1Q8TE82 1336 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 H7C1W4 665 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 SEMA3EO15041 775 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 GNPATO15228 680 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 PDE8AO60658 829 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 NTSR2O95665 410 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ZNF827Q17R98 1081 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ZKSCAN2Q63HK3 967 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 MCM10Q7L590 875 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 RTKN2Q8IZC4 609 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 DNAAF4Q8WXU2 420 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 MASTLQ96GX5 879 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 UTP14AQ9BVJ6 771 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms