RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CARMIL3Q8ND23 1372 aa29.11■■■□□ 2.25
SHISA4-203ENST00000481699 ZBTB7AO95365 584 aa29.1■■■□□ 2.25
SHISA4-203ENST00000481699 NEFLP07196 543 aa29.1■■■□□ 2.25
SHISA4-203ENST00000481699 UTP14AQ9BVJ6 771 aaKnown RBP29.1■■■□□ 2.25
SHISA4-203ENST00000481699 NYXQ9GZU5 481 aa29.1■■■□□ 2.25
SHISA4-203ENST00000481699 MTFR1LQ9H019 292 aa29.1■■■□□ 2.25
SHISA4-203ENST00000481699 PARP3Q9Y6F1 533 aa29.1■■■□□ 2.25
SHISA4-203ENST00000481699 GTF2E1P29083 439 aaPredicted RBP29.09■■■□□ 2.25
SHISA4-203ENST00000481699 GCKRQ14397 625 aa29.09■■■□□ 2.25
SHISA4-203ENST00000481699 MVPQ14764 893 aaKnown RBP29.09■■■□□ 2.25
SHISA4-203ENST00000481699 NBPF5PQ86XG9 351 aaPredicted RBP29.09■■■□□ 2.25
SHISA4-203ENST00000481699 TRMT112Q9UI30 125 aaKnown RBP29.09■■■□□ 2.25
SHISA4-203ENST00000481699 UBN2Q6ZU65 1347 aa29.09■■■□□ 2.25
SHISA4-203ENST00000481699 ANKRD36CQ5JPF3 1778 aa29.08■■■□□ 2.25
SHISA4-203ENST00000481699 MMP10P09238 476 aa29.08■■■□□ 2.25
SHISA4-203ENST00000481699 TM4SF1P30408 202 aa29.08■■■□□ 2.25
SHISA4-203ENST00000481699 CHMP4BQ9H444 224 aaKnown RBP29.08■■■□□ 2.25
SHISA4-203ENST00000481699 SUSD4Q5VX71 490 aa29.07■■■□□ 2.24
SHISA4-203ENST00000481699 DDX19BQ9UMR2 479 aa29.07■■■□□ 2.24
SHISA4-203ENST00000481699 POLD1P28340 1107 aa29.06■■■□□ 2.24
SHISA4-203ENST00000481699 TPTE2Q6XPS3 522 aa29.06■■■□□ 2.24
SHISA4-203ENST00000481699 GRM8O00222 908 aa29.05■■■□□ 2.24
SHISA4-203ENST00000481699 ATF5Q9Y2D1 282 aaPredicted RBP29.05■■■□□ 2.24
SHISA4-203ENST00000481699 CASZ1Q86V15 1759 aa29.05■■■□□ 2.24
SHISA4-203ENST00000481699 SERPINB2P05120 415 aa29.04■■■□□ 2.24
SHISA4-203ENST00000481699 IRX6P78412 446 aaPredicted RBP29.04■■■□□ 2.24
SHISA4-203ENST00000481699 CNBD1Q8NA66 436 aa29.04■■■□□ 2.24
SHISA4-203ENST00000481699 ZBTB38Q8NAP3 1195 aaPredicted RBP29.04■■■□□ 2.24
SHISA4-203ENST00000481699 HDAC5Q9UQL6 1122 aa29.04■■■□□ 2.24
SHISA4-203ENST00000481699 AFDNP55196 1824 aaKnown RBP29.04■■■□□ 2.24
SHISA4-203ENST00000481699 SH3TC1Q8TE82 1336 aa29.03■■■□□ 2.24
SHISA4-203ENST00000481699 POLRMTO00411 1230 aaKnown RBP29.03■■■□□ 2.24
SHISA4-203ENST00000481699 PCCAP05165 728 aaPredicted RBP29.03■■■□□ 2.24
SHISA4-203ENST00000481699 GNAI3P08754 354 aa29.03■■■□□ 2.24
SHISA4-203ENST00000481699 DDR1Q08345 913 aa29.03■■■□□ 2.24
SHISA4-203ENST00000481699 RTL5Q5HYW3 569 aaPredicted RBP29.03■■■□□ 2.24
SHISA4-203ENST00000481699 IBTKQ9P2D0 1353 aaPredicted RBP29.02■■■□□ 2.24
SHISA4-203ENST00000481699 NTSR2O95665 410 aa29.02■■■□□ 2.24
SHISA4-203ENST00000481699 UBTFL1P0CB47 393 aaPredicted RBP29.02■■■□□ 2.24
SHISA4-203ENST00000481699 HSP90B1P14625 803 aaKnown RBP29.02■■■□□ 2.24
SHISA4-203ENST00000481699 UBE3BQ7Z3V4 1068 aa29.02■■■□□ 2.24
SHISA4-203ENST00000481699 CRBNQ96SW2 442 aa29.02■■■□□ 2.24
SHISA4-203ENST00000481699 PPP1R1BQ9UD71 204 aaPredicted RBP29.02■■■□□ 2.24
SHISA4-203ENST00000481699 N4BP2Q86UW6 1770 aaPredicted RBP29.01■■■□□ 2.23
SHISA4-203ENST00000481699 ST5P78524 1137 aa29.01■■■□□ 2.23
SHISA4-203ENST00000481699 FAM89AQ96GI7 184 aa29.01■■■□□ 2.23
SHISA4-203ENST00000481699 JARID2Q92833 1246 aaPredicted RBP29■■■□□ 2.23
SHISA4-203ENST00000481699 USP44Q9H0E7 712 aa29■■■□□ 2.23
SHISA4-203ENST00000481699 H7C1W4 665 aa28.99■■■□□ 2.23
SHISA4-203ENST00000481699 NUTM1Q86Y26 1132 aa28.99■■■□□ 2.23
SHISA4-203ENST00000481699 MEIS3Q99687 375 aa28.99■■■□□ 2.23
SHISA4-203ENST00000481699 SPON1Q9HCB6 807 aa28.98■■■□□ 2.23
SHISA4-203ENST00000481699 COL24A1Q17RW2 1714 aa28.97■■■□□ 2.23
SHISA4-203ENST00000481699 IRS4O14654 1257 aaPredicted RBP28.97■■■□□ 2.23
SHISA4-203ENST00000481699 NBPF7P0C2Y1 421 aaPredicted RBP28.97■■■□□ 2.23
SHISA4-203ENST00000481699 ERFEQ4G0M1 354 aa28.97■■■□□ 2.23
SHISA4-203ENST00000481699 ZBTB7BO15156 539 aaPredicted RBP28.96■■■□□ 2.23
SHISA4-203ENST00000481699 PRR5LQ6MZQ0 368 aa28.96■■■□□ 2.23
SHISA4-203ENST00000481699 UTYO14607 1347 aa28.95■■■□□ 2.23
SHISA4-203ENST00000481699 CDHR2Q9BYE9 1310 aa28.95■■■□□ 2.23
SHISA4-203ENST00000481699 GNAI2P04899 355 aa28.95■■■□□ 2.22
SHISA4-203ENST00000481699 SYNE4Q8N205 404 aa28.93■■■□□ 2.22
SHISA4-203ENST00000481699 CCDC24Q8N4L8 307 aa28.93■■■□□ 2.22
SHISA4-203ENST00000481699 HCLS1P14317 486 aaPredicted RBP28.92■■■□□ 2.22
SHISA4-203ENST00000481699 EXOC6Q8TAG9 804 aa28.92■■■□□ 2.22
SHISA4-203ENST00000481699 PDE8AO60658 829 aa28.91■■■□□ 2.22
SHISA4-203ENST00000481699 CASP7P55210 303 aa28.91■■■□□ 2.22
SHISA4-203ENST00000481699 SUCLG2Q96I99 432 aa28.91■■■□□ 2.22
SHISA4-203ENST00000481699 LRRFIP2Q9Y608 721 aaKnown RBP28.91■■■□□ 2.22
SHISA4-203ENST00000481699 AAMPQ13685 434 aa28.9■■■□□ 2.22
SHISA4-203ENST00000481699 SLC10A5Q5PT55 438 aa28.9■■■□□ 2.22
SHISA4-203ENST00000481699 NLRP3Q96P20 1036 aa28.9■■■□□ 2.22
SHISA4-203ENST00000481699 ZBTB40Q9NUA8 1239 aa28.9■■■□□ 2.22
SHISA4-203ENST00000481699 ABCC12Q96J65 1359 aa28.89■■■□□ 2.22
SHISA4-203ENST00000481699 DCAF8L1A6NGE4 600 aa28.88■■■□□ 2.21
SHISA4-203ENST00000481699 BRIP1Q9BX63 1249 aa28.88■■■□□ 2.21
SHISA4-203ENST00000481699 PLA2G12BQ9BX93 195 aa28.88■■■□□ 2.21
SHISA4-203ENST00000481699 C1orf115Q9H7X2 142 aa28.88■■■□□ 2.21
SHISA4-203ENST00000481699 CHMP3Q9Y3E7 222 aa28.87■■■□□ 2.21
SHISA4-203ENST00000481699 PDE6BP35913 854 aa28.86■■■□□ 2.21
SHISA4-203ENST00000481699 PTGER2P43116 358 aa28.86■■■□□ 2.21
SHISA4-203ENST00000481699 CTSWP56202 376 aa28.86■■■□□ 2.21
SHISA4-203ENST00000481699 BICC1Q9H694 974 aaKnown RBP28.86■■■□□ 2.21
SHISA4-203ENST00000481699 KLHL34Q8N239 644 aa28.85■■■□□ 2.21
SHISA4-203ENST00000481699 SGIP1Q9BQI5 828 aa28.85■■■□□ 2.21
SHISA4-203ENST00000481699 NRXN2Q9P2S2 1712 aa28.85■■■□□ 2.21
SHISA4-203ENST00000481699 RIC1Q4ADV7 1423 aa28.85■■■□□ 2.21
SHISA4-203ENST00000481699 CCDC152Q4G0S7 254 aa28.84■■■□□ 2.21
SHISA4-203ENST00000481699 FOXO4P98177 505 aa28.83■■■□□ 2.21
SHISA4-203ENST00000481699 LMBR1LQ6UX01 489 aa28.83■■■□□ 2.21
SHISA4-203ENST00000481699 EPHA10Q5JZY3 1008 aa28.82■■■□□ 2.2
SHISA4-203ENST00000481699 RPGRQ92834 1020 aaKnown RBP28.82■■■□□ 2.2
SHISA4-203ENST00000481699 PDZRN3Q9UPQ7 1066 aa28.82■■■□□ 2.2
SHISA4-203ENST00000481699 C10orf71Q711Q0 1435 aa28.81■■■□□ 2.2
SHISA4-203ENST00000481699 KAZALD1Q96I82 304 aa28.81■■■□□ 2.2
SHISA4-203ENST00000481699 CCDC85AQ96PX6 553 aaPredicted RBP28.81■■■□□ 2.2
SHISA4-203ENST00000481699 ANKRD44Q8N8A2 993 aa28.8■■■□□ 2.2
SHISA4-203ENST00000481699 TTLL11Q8NHH1 800 aa28.8■■■□□ 2.2
SHISA4-203ENST00000481699 LAMB2P55268 1798 aa28.8■■■□□ 2.2
SHISA4-203ENST00000481699 H0YIN7 160 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms