RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 NOGQ13253 232 aa12.72□□□□□ -0.37
SMARCE1-210ENST00000481231 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-210ENST00000481231 LARGE2Q8N3Y3 721 aa12.71□□□□□ -0.37
SMARCE1-210ENST00000481231 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
SMARCE1-210ENST00000481231 ADARB2Q9NS39 739 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-210ENST00000481231 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
SMARCE1-210ENST00000481231 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-210ENST00000481231 HUNKP57058 714 aa12.69□□□□□ -0.38
SMARCE1-210ENST00000481231 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-210ENST00000481231 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
SMARCE1-210ENST00000481231 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
SMARCE1-210ENST00000481231 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
SMARCE1-210ENST00000481231 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 TRPA1O75762 1119 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 ALDH1B1P30837 517 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 NIM1KQ8IY84 436 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
SMARCE1-210ENST00000481231 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 TEFQ10587 303 aa12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 TRPM4Q8TD43 1214 aa12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
SMARCE1-210ENST00000481231 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 AOC3Q16853 763 aa12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
SMARCE1-210ENST00000481231 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 PPIP5K2O43314 1243 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 KCNQ3O43525 872 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 CRY2Q49AN0 593 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
SMARCE1-210ENST00000481231 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 CXCL9Q07325 125 aa12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 CDC37L1Q7L3B6 337 aa12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
SMARCE1-210ENST00000481231 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-210ENST00000481231 HLFQ16534 295 aa12.63□□□□□ -0.39
SMARCE1-210ENST00000481231 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
SMARCE1-210ENST00000481231 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
SMARCE1-210ENST00000481231 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
SMARCE1-210ENST00000481231 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
SMARCE1-210ENST00000481231 ZNF157P51786 506 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-210ENST00000481231 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-210ENST00000481231 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-210ENST00000481231 RAD17O75943 681 aa12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 ZC3H15Q8WU90 426 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 BCL2L13Q9BXK5 485 aa12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 ZNRF3Q9ULT6 936 aa12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-210ENST00000481231 BTBD11A6QL63 1104 aa12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 CCDC102AQ96A19 550 aa12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 RIC1Q4ADV7 1423 aa12.6□□□□□ -0.39
SMARCE1-210ENST00000481231 SLC10A3P09131 477 aa12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 CDHR2Q9BYE9 1310 aa12.59□□□□□ -0.39
SMARCE1-210ENST00000481231 EGFRP00533 1210 aa12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 CNOT7Q9UIV1 285 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
SMARCE1-210ENST00000481231 U2AF1L5P0DN76 240 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 U2AF1Q01081 240 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 PKN2Q16513 984 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 MCM10Q7L590 875 aa12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 SAMD7Q7Z3H4 446 aa12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-210ENST00000481231 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 GPTP24298 496 aa12.56□□□□□ -0.4
SMARCE1-210ENST00000481231 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms