RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TM4SF1P30408 202 aa15.83■□□□□ 0.12
TRAPPC12-218ENST00000479897 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
TRAPPC12-218ENST00000479897 COG6Q9Y2V7 657 aa15.83■□□□□ 0.12
TRAPPC12-218ENST00000479897 GRM8O00222 908 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 NTSR2O95665 410 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 AAMPQ13685 434 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 NFIXQ14938 502 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 USP44Q9H0E7 712 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
TRAPPC12-218ENST00000479897 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 MSH5O43196 834 aa15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 PCCAP05165 728 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 GPTP24298 496 aa15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 R3HDM1Q15032 1099 aaKnown RBP15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 CRBNQ96SW2 442 aa15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 SETDB2Q96T68 719 aa15.81■□□□□ 0.12
TRAPPC12-218ENST00000479897 H7C1W4 665 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 NEFLP07196 543 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 GNAI3P08754 354 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 CASP7P55210 303 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 ZBTB38Q8NAP3 1195 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 MEIS3Q99687 375 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 PDGFDQ9GZP0 370 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 NYXQ9GZU5 481 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
TRAPPC12-218ENST00000479897 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 DDR1Q08345 913 aa15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 ZBTB40Q9NUA8 1239 aa15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 ANKRD31Q8N7Z5 1873 aa15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-218ENST00000479897 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
TRAPPC12-218ENST00000479897 NBPF7P0C2Y1 421 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC12-218ENST00000479897 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
TRAPPC12-218ENST00000479897 TRMT112Q9UI30 125 aaKnown RBP15.78■□□□□ 0.12
TRAPPC12-218ENST00000479897 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
TRAPPC12-218ENST00000479897 MMP10P09238 476 aa15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 UBTFL1P0CB47 393 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 ERICH6BQ5W0A0 696 aa15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 BICDL1Q6ZP65 573 aa15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 UBE3BQ7Z3V4 1068 aa15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.12
TRAPPC12-218ENST00000479897 ABCC12Q96J65 1359 aa15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 SERPINB2P05120 415 aa15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 HSP90B1P14625 803 aaKnown RBP15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 MSL1Q68DK7 614 aa15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
TRAPPC12-218ENST00000479897 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 GNAI2P04899 355 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 PRR5LQ6MZQ0 368 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 CNBD1Q8NA66 436 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 C10orf71Q711Q0 1435 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
TRAPPC12-218ENST00000479897 MTX1Q13505 466 aa15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 RABL6Q3YEC7 729 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 KAZALD1Q96I82 304 aa15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 SUCLG2Q96I99 432 aa15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 SGIP1Q9BQI5 828 aa15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC12-218ENST00000479897 LRP5O75197 1615 aa15.73■□□□□ 0.11
TRAPPC12-218ENST00000479897 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC12-218ENST00000479897 LRRFIP2Q9Y608 721 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-218ENST00000479897 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
TRAPPC12-218ENST00000479897 KIAA1551Q9HCM1 1747 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 PDE8AO60658 829 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 ST5P78524 1137 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 NUTM1Q86Y26 1132 aa15.72■□□□□ 0.11
TRAPPC12-218ENST00000479897 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 CTSWP56202 376 aa15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 FOXO4P98177 505 aa15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 ANKRD44Q8N8A2 993 aa15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 BICC1Q9H694 974 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-218ENST00000479897 KLRG2A4D1S0 409 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 CSF1RP07333 972 aa15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 POLD1P28340 1107 aa15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 CEP85Q6P2H3 762 aa15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 JARID2Q92833 1246 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-218ENST00000479897 NPHP1O15259 732 aa15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 PTGER2P43116 358 aa15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 CRY2Q49AN0 593 aa15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 BRIP1Q9BX63 1249 aa15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 C1orf115Q9H7X2 142 aa15.69■□□□□ 0.1
TRAPPC12-218ENST00000479897 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms