RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGCL-205ENST00000479458 CCDC93Q567U6 631 aa10.17□□□□□ -0.78
HMGCL-205ENST00000479458 HABP4Q5JVS0 413 aaKnown RBP10.17□□□□□ -0.78
HMGCL-205ENST00000479458 PRPF40BQ6NWY9 871 aaKnown RBP10.17□□□□□ -0.78
HMGCL-205ENST00000479458 MASTLQ96GX5 879 aa10.17□□□□□ -0.78
HMGCL-205ENST00000479458 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
HMGCL-205ENST00000479458 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 RNF123Q5XPI4 1314 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 HTATSF1O43719 755 aaKnown RBP10.16□□□□□ -0.78
HMGCL-205ENST00000479458 AOC2O75106 756 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 SOX10P56693 466 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 TEFQ10587 303 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 NOGQ13253 232 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 SLC39A6Q13433 755 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 PRR5LQ6MZQ0 368 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 PAXIP1Q6ZW49 1069 aaPredicted RBP10.16□□□□□ -0.78
HMGCL-205ENST00000479458 USP50Q70EL3 339 aaPredicted RBP10.16□□□□□ -0.78
HMGCL-205ENST00000479458 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 RTF1Q92541 710 aaKnown RBP10.16□□□□□ -0.78
HMGCL-205ENST00000479458 BCORQ6W2J9 1755 aa10.16□□□□□ -0.78
HMGCL-205ENST00000479458 MAPK8IP3Q9UPT6 1336 aa10.15□□□□□ -0.78
HMGCL-205ENST00000479458 DCTN1Q14203 1278 aa10.15□□□□□ -0.78
HMGCL-205ENST00000479458 WDR43Q15061 677 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGCL-205ENST00000479458 MCM10Q7L590 875 aa10.15□□□□□ -0.78
HMGCL-205ENST00000479458 DNAJC10Q8IXB1 793 aa10.15□□□□□ -0.78
HMGCL-205ENST00000479458 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
HMGCL-205ENST00000479458 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.79
HMGCL-205ENST00000479458 SCN7AQ01118 1682 aa10.15□□□□□ -0.79
HMGCL-205ENST00000479458 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.79
HMGCL-205ENST00000479458 A0A087WZG4 1122 aa10.14□□□□□ -0.79
HMGCL-205ENST00000479458 ANP32CO43423 234 aa10.14□□□□□ -0.79
HMGCL-205ENST00000479458 EIF5P55010 431 aaKnown RBP10.14□□□□□ -0.79
HMGCL-205ENST00000479458 CCDC184Q52MB2 194 aa10.14□□□□□ -0.79
HMGCL-205ENST00000479458 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
HMGCL-205ENST00000479458 KLRG2A4D1S0 409 aaPredicted RBP10.13□□□□□ -0.79
HMGCL-205ENST00000479458 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 PKN2Q16513 984 aaKnown RBP10.13□□□□□ -0.79
HMGCL-205ENST00000479458 CIAPIN1Q6FI81 312 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 ZNF790Q6PG37 636 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 CCDC146Q8IYE0 955 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 TTC5Q8N0Z6 440 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 PGAP2Q9UHJ9 254 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 HEG1Q9ULI3 1381 aa10.13□□□□□ -0.79
HMGCL-205ENST00000479458 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 KCNQ3O43525 872 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
HMGCL-205ENST00000479458 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
HMGCL-205ENST00000479458 TMPOP42166 694 aaKnown RBP10.12□□□□□ -0.79
HMGCL-205ENST00000479458 SCNN1DP51172 638 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
HMGCL-205ENST00000479458 GRM1Q13255 1194 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 RUNDC1Q96C34 613 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 ZNF496Q96IT1 587 aaPredicted RBP10.12□□□□□ -0.79
HMGCL-205ENST00000479458 PSMD1Q99460 953 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 SNED1Q8TER0 1413 aa10.12□□□□□ -0.79
HMGCL-205ENST00000479458 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGCL-205ENST00000479458 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
HMGCL-205ENST00000479458 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
HMGCL-205ENST00000479458 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
HMGCL-205ENST00000479458 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
HMGCL-205ENST00000479458 ZNF277Q9NRM2 450 aaPredicted RBP10.11□□□□□ -0.79
HMGCL-205ENST00000479458 TRAF5O00463 557 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 CELF2O95319 508 aaKnown RBP10.1□□□□□ -0.79
HMGCL-205ENST00000479458 NPR1P16066 1061 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
HMGCL-205ENST00000479458 RIPK4P57078 832 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 ST5P78524 1137 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 CNBD1Q8NA66 436 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
HMGCL-205ENST00000479458 JDP2Q8WYK2 163 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
HMGCL-205ENST00000479458 KDM3BQ7LBC6 1761 aa10.1□□□□□ -0.79
HMGCL-205ENST00000479458 EPS15P42566 896 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 LMOD3Q0VAK6 560 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
HMGCL-205ENST00000479458 RGL2O15211 777 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 STARD3NLO95772 234 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 MIER1Q8N108 512 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 SYNE4Q8N205 404 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
HMGCL-205ENST00000479458 TEX13AQ9BXU3 409 aaPredicted RBP10.08□□□□□ -0.8
HMGCL-205ENST00000479458 ADARB2Q9NS39 739 aaKnown RBP10.08□□□□□ -0.8
HMGCL-205ENST00000479458 MIS18AQ9NYP9 233 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
HMGCL-205ENST00000479458 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 FAM155AB1AL88 458 aaPredicted RBP10.07□□□□□ -0.8
HMGCL-205ENST00000479458 APAF1O14727 1248 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 ALDH1B1P30837 517 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms