RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 FAM98CQ17RN3 349 aaKnown RBP5.05□□□□□ -1.6
USP25-208ENST00000478932 MARCH10Q8NA82 808 aaPredicted RBP5.05□□□□□ -1.6
USP25-208ENST00000478932 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
USP25-208ENST00000478932 ANTXR1Q9H6X2 564 aa5.05□□□□□ -1.6
USP25-208ENST00000478932 ANO2Q9NQ90 1003 aa5.05□□□□□ -1.6
USP25-208ENST00000478932 TLR7Q9NYK1 1049 aaKnown RBP5.05□□□□□ -1.6
USP25-208ENST00000478932 TBC1D2BQ9UPU7 963 aa5.05□□□□□ -1.6
USP25-208ENST00000478932 LTBP4Q8N2S1 1624 aa5.05□□□□□ -1.6
USP25-208ENST00000478932 PLEKHG2Q9H7P9 1386 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 PKD1L3Q7Z443 1732 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 C19orf67A6NJJ6 358 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 REC8O95072 547 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 KCNQ4P56696 695 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 MYT1Q01538 1121 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 FAM182BQ5T319 152 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 ESYT1Q9BSJ8 1104 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 CWC25Q9NXE8 425 aaPredicted RBP5.04□□□□□ -1.6
USP25-208ENST00000478932 H7C1W4 665 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 CYP19A1P11511 503 aaPredicted RBP5.04□□□□□ -1.6
USP25-208ENST00000478932 CASP7P55210 303 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 FOXO4P98177 505 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 HLFQ16534 295 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 CWC27Q6UX04 472 aaKnown RBP5.04□□□□□ -1.6
USP25-208ENST00000478932 HSCBQ8IWL3 235 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 ZNF594Q96JF6 807 aaPredicted RBP5.04□□□□□ -1.6
USP25-208ENST00000478932 ECHDC1Q9NTX5 307 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 ZBTB1Q9Y2K1 713 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 NDUFB9Q9Y6M9 179 aa5.04□□□□□ -1.6
USP25-208ENST00000478932 ERBB4Q15303 1308 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 ABCA3Q99758 1704 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 BCL9O00512 1426 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 HSP90AA1P07900 732 aaKnown RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 RFX5P48382 616 aaPredicted RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 TFCP2Q12800 502 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 PTF1AQ7RTS3 328 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 ERC1Q8IUD2 1116 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 VSIG10Q8N0Z9 540 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 CCDC191Q8NCU4 936 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 EDC3Q96F86 508 aaKnown RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 TEX13AQ9BXU3 409 aaPredicted RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 BOLA2Q9H3K6 86 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 PALD1Q9ULE6 856 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 SPATA31A5Q5VU36 1347 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 SPATA31A7Q8IWB4 1347 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 KCPQ6ZWJ8 1503 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 GLRX3O76003 335 aaKnown RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 TIMM10P62072 90 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 TCIRG1Q13488 830 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 RABL6Q3YEC7 729 aaPredicted RBP5.03□□□□□ -1.6
USP25-208ENST00000478932 COPRSQ9NQ92 184 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 CLEC11AQ9Y240 323 aa5.03□□□□□ -1.6
USP25-208ENST00000478932 DISP2A7MBM2 1401 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 PARP4Q9UKK3 1724 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 FAM177BA6PVY3 158 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 ATP6V1AP38606 617 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 NEK4P51957 841 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 LRRC24Q50LG9 513 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 SMIM5Q71RC9 77 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 SNX21Q969T3 373 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 NEUROD6Q96NK8 337 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 PUS3Q9BZE2 481 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 UPF3BQ9BZI7 483 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 DBNLQ9UJU6 430 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 TNS2Q63HR2 1409 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 LOC102724428A0A0B4J2F2 783 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 CHGBP05060 677 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 SIK1P57059 783 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 GIGYF2Q6Y7W6 1299 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 KIF6Q6ZMV9 814 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 CNTROBQ8N137 903 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 ISCA1Q9BUE6 129 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 THRAP3Q9Y2W1 955 aaKnown RBP5.02□□□□□ -1.61
USP25-208ENST00000478932 TTC41PQ6P2S7 1318 aa5.02□□□□□ -1.61
USP25-208ENST00000478932 K7ELQ4 463 aaPredicted RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 SGSM2O43147 1006 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 ITPK1Q13572 414 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 RABEP1Q15276 862 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 TNNI3KQ59H18 835 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 ATG9AQ7Z3C6 839 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 DZIP3Q86Y13 1208 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 GPATCH3Q96I76 525 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 FAM227BQ96M60 508 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 DBNDD2Q9BQY9 259 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 CDCA7Q9BWT1 371 aaPredicted RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 DIAPH3Q9NSV4 1193 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 FPGT-TNNI3KV9GXZ4 949 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 SHANK3Q9BYB0 1731 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 AHDC1Q5TGY3 1603 aaPredicted RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 AOX1Q06278 1338 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 MAP3K15Q6ZN16 1313 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 GLI3P10071 1580 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 CRKLP46109 303 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 CLCN6P51797 869 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 TRIM28Q13263 835 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 CCDC57Q2TAC2 916 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 INTS5Q6P9B9 1019 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 NOL8Q76FK4 1167 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 NLRP10Q86W26 655 aa5.01□□□□□ -1.61
USP25-208ENST00000478932 TRMT112Q9UI30 125 aaKnown RBP5.01□□□□□ -1.61
USP25-208ENST00000478932 COL16A1Q07092 1604 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms