RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	ITGB4	P16144	1822 aa		11.79	□□□□□ -0.52
ATG7-223	ENST00000478638	CIC	Q96RK0	1608 aa	Predicted RBP	11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	EPB41L2	O43491	1005 aa	Known RBP	11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	SMARCA5	O60264	1052 aa	Predicted RBP	11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	IGKV5-2	P06315	115 aa		11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	SSFA2	P28290	1259 aa		11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	IL17RA	Q96F46	866 aa		11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	ARX	Q96QS3	562 aa		11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	METTL22	Q9BUU2	404 aa	Predicted RBP	11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	EXOC6B	Q9Y2D4	811 aa		11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.78	□□□□□ -0.52
ATG7-223	ENST00000478638	AFDN	P55196	1824 aa	Known RBP	11.77	□□□□□ -0.52
ATG7-223	ENST00000478638		A0A087WZG4	1122 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	GRM8	O00222	908 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	ADRA2B	P18089	450 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	RFC4	P35249	363 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	HSP90AB4P	Q58FF6	505 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	SMIM5	Q71RC9	77 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	COL23A1	Q86Y22	540 aa	Predicted RBP	11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	KAZALD1	Q96I82	304 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	ZBTB1	Q9Y2K1	713 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	TJP1	Q07157	1748 aa		11.77	□□□□□ -0.53
ATG7-223	ENST00000478638	NEURL1B	A8MQ27	555 aa		11.76	□□□□□ -0.53
ATG7-223	ENST00000478638	MX1	P20591	662 aa		11.76	□□□□□ -0.53
ATG7-223	ENST00000478638	ARHGEF1	Q92888	912 aa	Known RBP	11.76	□□□□□ -0.53
ATG7-223	ENST00000478638	KIF1BP	Q96EK5	621 aa		11.76	□□□□□ -0.53
ATG7-223	ENST00000478638	PNPLA7	Q6ZV29	1317 aa		11.76	□□□□□ -0.53
ATG7-223	ENST00000478638	ZPR1	O75312	459 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	IL6ST	P40189	918 aa	Predicted RBP	11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	PIP4K2A	P48426	406 aa	Predicted RBP	11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	SLC4A3	P48751	1232 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	RHPN1	Q8TCX5	695 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	SLC16A10	Q8TF71	515 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	XAGE3	Q8WTP9	111 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	USP26	Q9BXU7	913 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	AK9	Q5TCS8	1911 aa		11.75	□□□□□ -0.53
ATG7-223	ENST00000478638	NBPF26	B4DH59	902 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	SRGAP3	O43295	1099 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	ZBTB7A	O95365	584 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	MYL6B	P14649	208 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	DDIT3	P35638	169 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	EIF5	P55010	431 aa	Known RBP	11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	CASP7	P55210	303 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	GCKR	Q14397	625 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	RABL6	Q3YEC7	729 aa	Predicted RBP	11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	NBPF10	Q6P3W6	841 aa	Known RBP	11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	COPS6	Q7L5N1	327 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	AMIGO3	Q86WK7	504 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	NBPF15	Q8N660	670 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	PLBD2	Q8NHP8	589 aa		11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	DAXX	Q9UER7	740 aa	Predicted RBP	11.74	□□□□□ -0.53
ATG7-223	ENST00000478638	CWF19L2	Q2TBE0	894 aa	Known RBP	11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	TTC41P	Q6P2S7	1318 aa		11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	ANKRD13D	Q6ZTN6	518 aa		11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	IL27	Q8NEV9	243 aa		11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	PI4K2B	Q8TCG2	481 aa		11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	SUCLG2	Q96I99	432 aa		11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.73	□□□□□ -0.53
ATG7-223	ENST00000478638	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	RGPD4	Q7Z3J3	1758 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	RREB1	Q92766	1687 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	SURF6	O75683	361 aa	Known RBP	11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	NEXN	Q0ZGT2	675 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	RIC3	Q7Z5B4	369 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	DZIP3	Q86Y13	1208 aa	Known RBP	11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	ERC1	Q8IUD2	1116 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	MTFR1L	Q9H019	292 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	SPON1	Q9HCB6	807 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	TBC1D2B	Q9UPU7	963 aa		11.72	□□□□□ -0.53
ATG7-223	ENST00000478638	REC8	O95072	547 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	POLD1	P28340	1107 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	MSL1	Q68DK7	614 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	CASC1	Q6TDU7	716 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	NLGN1	Q8N2Q7	840 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	SRP68	Q9UHB9	627 aa	Known RBP	11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	NARF	Q9UHQ1	456 aa		11.71	□□□□□ -0.53
ATG7-223	ENST00000478638	LY75	O60449	1722 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638		H7C1W4	665 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	ERC2	O15083	957 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	CHML	P26374	656 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	RFX5	P48382	616 aa	Predicted RBP	11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	AIMP1	Q12904	312 aa	Known RBP	11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	RABEP1	Q15276	862 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	USPL1	Q5W0Q7	1092 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	KIF6	Q6ZMV9	814 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	ESYT1	Q9BSJ8	1104 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	BICC1	Q9H694	974 aa	Known RBP	11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	COPRS	Q9NQ92	184 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	ZNF831	Q5JPB2	1677 aa		11.7	□□□□□ -0.54
ATG7-223	ENST00000478638	APBB1	O00213	710 aa		11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	GYS1	P13807	737 aa		11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	TRIM28	Q13263	835 aa	Known RBP	11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	NFKBIB	Q15653	356 aa		11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	ANKRD36C	Q5JPF3	1778 aa		11.69	□□□□□ -0.54
ATG7-223	ENST00000478638	SASH1	O94885	1247 aa		11.68	□□□□□ -0.54
ATG7-223	ENST00000478638	ANAPC15	P60006	121 aa		11.68	□□□□□ -0.54

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