RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 ACEP12821 1306 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 PHLPP1O60346 1717 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 PSME1Q06323 249 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 GAS6Q14393 721 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 FOXD4L6Q3SYB3 417 aaPredicted RBP6.09□□□□□ -1.43
CNTN3-202ENST00000477856 FOXD4L3Q6VB84 417 aaPredicted RBP6.09□□□□□ -1.43
CNTN3-202ENST00000477856 HDGFL2Q7Z4V5 671 aaPredicted RBP6.09□□□□□ -1.43
CNTN3-202ENST00000477856 NGDNQ8NEJ9 315 aaKnown RBP6.09□□□□□ -1.43
CNTN3-202ENST00000477856 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 MBIPQ9NS73 344 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 LRRC4BQ9NT99 713 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 CABP1Q9NZU7 370 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 COL16A1Q07092 1604 aaPredicted RBP6.09□□□□□ -1.43
CNTN3-202ENST00000477856 NRKQ7Z2Y5 1582 aa6.09□□□□□ -1.43
CNTN3-202ENST00000477856 CD163L1Q9NR16 1453 aa6.09□□□□□ -1.44
CNTN3-202ENST00000477856 USP6P35125 1406 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 CPSF1Q10570 1443 aaKnown RBP6.08□□□□□ -1.44
CNTN3-202ENST00000477856 TNS3Q68CZ2 1445 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 EDC4Q6P2E9 1401 aaKnown RBP6.08□□□□□ -1.44
CNTN3-202ENST00000477856 TRPM3Q9HCF6 1732 aaPredicted RBP6.08□□□□□ -1.44
CNTN3-202ENST00000477856 A0A1W2PP64 1363 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 SBNO1A3KN83 1393 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 KTN1Q86UP2 1357 aaKnown RBP6.08□□□□□ -1.44
CNTN3-202ENST00000477856 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 PAX4O43316 350 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 FOXO3O43524 673 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 COL8A1P27658 744 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 SNRPNP63162 240 aaKnown RBP6.08□□□□□ -1.44
CNTN3-202ENST00000477856 PMFBP1Q8TBY8 1022 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 POLR3GLQ9BT43 218 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 SLC12A5Q9H2X9 1139 aa6.08□□□□□ -1.44
CNTN3-202ENST00000477856 ARHGEF10O15013 1369 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 TTC21AQ8NDW8 1320 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 GRIN2CQ14957 1233 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 KRT28Q7Z3Y7 464 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 LRRC59Q96AG4 307 aaKnown RBP6.07□□□□□ -1.44
CNTN3-202ENST00000477856 SHPRHQ149N8 1683 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 ALS2Q96Q42 1657 aa6.07□□□□□ -1.44
CNTN3-202ENST00000477856 COL22A1Q8NFW1 1626 aaPredicted RBP6.07□□□□□ -1.44
CNTN3-202ENST00000477856 MED1Q15648 1581 aaPredicted RBP6.06□□□□□ -1.44
CNTN3-202ENST00000477856 FCHSD2O94868 740 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 NR3C2P08235 984 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 ZNF511Q8NB15 262 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 CDK15Q96Q40 435 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 USP54Q70EL1 1684 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 SSH2Q76I76 1423 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 NSD3Q9BZ95 1437 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 JCADQ9P266 1359 aa6.06□□□□□ -1.44
CNTN3-202ENST00000477856 SPATA31A3Q5VYP0 1347 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 PIK3C2AO00443 1686 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 KIF20BQ96Q89 1820 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 XPCQ01831 940 aaPredicted RBP6.05□□□□□ -1.44
CNTN3-202ENST00000477856 DDX17Q92841 729 aaKnown RBP6.05□□□□□ -1.44
CNTN3-202ENST00000477856 ACDQ96AP0 544 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 UNC93B1Q9H1C4 597 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 NSD2O96028 1365 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 PNPLA6Q8IY17 1366 aa6.05□□□□□ -1.44
CNTN3-202ENST00000477856 CGNL1Q0VF96 1302 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 SPATA31A6Q5VVP1 1343 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 TTC21BQ7Z4L5 1316 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 CCNYL3P0C7X3 344 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 HSPA1LP34931 641 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 FOXR1Q6PIV2 292 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 ABTB2Q8N961 1025 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 PANK3Q9H999 370 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 WDR70Q9NW82 654 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 KNSTRNQ9Y448 316 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 USP31Q70CQ4 1352 aa6.04□□□□□ -1.44
CNTN3-202ENST00000477856 PHRF1Q9P1Y6 1649 aaKnown RBP6.03□□□□□ -1.44
CNTN3-202ENST00000477856 ABCA3Q99758 1704 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 ANKRD26Q9UPS8 1709 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 OVOS2A0A0J9YW53 1432 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 OVOS2Q6IE36 1432 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 NLRP13Q86W25 1043 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.03□□□□□ -1.44
CNTN3-202ENST00000477856 RRAGCQ9HB90 399 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 SLIT3O75094 1523 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 NPC1L1Q9UHC9 1359 aa6.03□□□□□ -1.44
CNTN3-202ENST00000477856 CRYBG1Q9Y4K1 1723 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 USP19O94966 1318 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 MCTP1Q6DN14 999 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 SPRYD3Q8NCJ5 442 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 KCNH5Q8NCM2 988 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 COG3Q96JB2 828 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 CARD14Q9BXL6 1004 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 ABCC6O95255 1503 aa6.02□□□□□ -1.45
CNTN3-202ENST00000477856 FYB1O15117 783 aa6.01□□□□□ -1.45
CNTN3-202ENST00000477856 PER1O15534 1290 aaPredicted RBP6.01□□□□□ -1.45
CNTN3-202ENST00000477856 OIP5O43482 229 aa6.01□□□□□ -1.45
CNTN3-202ENST00000477856 HAP1P54257 671 aaPredicted RBP6.01□□□□□ -1.45
CNTN3-202ENST00000477856 NME9Q86XW9 330 aa6.01□□□□□ -1.45
CNTN3-202ENST00000477856 MARF1Q9Y4F3 1742 aaKnown RBP6.01□□□□□ -1.45
CNTN3-202ENST00000477856 CPDO75976 1380 aa6.01□□□□□ -1.45
CNTN3-202ENST00000477856 NFAT5O94916 1531 aa6□□□□□ -1.45
CNTN3-202ENST00000477856 PIK3R2O00459 728 aa6□□□□□ -1.45
CNTN3-202ENST00000477856 CHRNA4P43681 627 aa6□□□□□ -1.45
CNTN3-202ENST00000477856 DDX10Q13206 875 aaKnown RBP6□□□□□ -1.45
CNTN3-202ENST00000477856 PAXIP1Q6ZW49 1069 aaPredicted RBP6□□□□□ -1.45
CNTN3-202ENST00000477856 CFAP44Q96MT7 982 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms