RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 WDR90Q96KV7 1748 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 RGPD5Q99666 1765 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 SYTL4Q96C24 671 aaPredicted RBP8.95□□□□□ -0.98
LINC00173-202ENST00000477702 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 IGSF1Q8N6C5 1336 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 CCDC7Q96M83 1385 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 TLL1O43897 1013 aa8.94□□□□□ -0.98
LINC00173-202ENST00000477702 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
LINC00173-202ENST00000477702 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
LINC00173-202ENST00000477702 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
LINC00173-202ENST00000477702 ZBTB3Q9H5J0 574 aa8.94□□□□□ -0.98
LINC00173-202ENST00000477702 ABCC6O95255 1503 aa8.94□□□□□ -0.98
LINC00173-202ENST00000477702 CFAP99D6REC4 459 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 IL2RBP14784 551 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 MTMR2Q13614 643 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 PRPF38BQ5VTL8 546 aaKnown RBP8.93□□□□□ -0.98
LINC00173-202ENST00000477702 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 DDX54Q8TDD1 881 aaKnown RBP8.93□□□□□ -0.98
LINC00173-202ENST00000477702 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
LINC00173-202ENST00000477702 TRPM1Q7Z4N2 1603 aa8.92□□□□□ -0.98
LINC00173-202ENST00000477702 NR1I2O75469 434 aa8.92□□□□□ -0.98
LINC00173-202ENST00000477702 HSPA1AP0DMV8 641 aaKnown RBP8.92□□□□□ -0.98
LINC00173-202ENST00000477702 HSPA1BP0DMV9 641 aaKnown RBP8.92□□□□□ -0.98
LINC00173-202ENST00000477702 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
LINC00173-202ENST00000477702 HCSTQ9UBK5 93 aa8.92□□□□□ -0.98
LINC00173-202ENST00000477702 CCNL1Q9UK58 526 aaPredicted RBP8.92□□□□□ -0.98
LINC00173-202ENST00000477702 C16orf71Q8IYS4 520 aaPredicted RBP8.91□□□□□ -0.98
LINC00173-202ENST00000477702 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
LINC00173-202ENST00000477702 PIK3C2AO00443 1686 aa8.91□□□□□ -0.98
LINC00173-202ENST00000477702 ZPR1O75312 459 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 AP1G2O75843 785 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 Q3C1V9 767 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 KCNH5Q8NCM2 988 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 TSC1Q92574 1164 aa8.9□□□□□ -0.98
LINC00173-202ENST00000477702 SMIM5Q71RC9 77 aa8.89□□□□□ -0.99
LINC00173-202ENST00000477702 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
LINC00173-202ENST00000477702 FAM160A2Q8N612 972 aaPredicted RBP8.89□□□□□ -0.99
LINC00173-202ENST00000477702 PRDM9Q9NQV7 894 aa8.89□□□□□ -0.99
LINC00173-202ENST00000477702 SNRKQ9NRH2 765 aa8.89□□□□□ -0.99
LINC00173-202ENST00000477702 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
LINC00173-202ENST00000477702 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
LINC00173-202ENST00000477702 FSTL1Q12841 308 aa8.88□□□□□ -0.99
LINC00173-202ENST00000477702 ARHGAP27Q6ZUM4 889 aa8.88□□□□□ -0.99
LINC00173-202ENST00000477702 USB1Q9BQ65 265 aaKnown RBP8.88□□□□□ -0.99
LINC00173-202ENST00000477702 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
LINC00173-202ENST00000477702 TIMELESSQ9UNS1 1208 aa8.88□□□□□ -0.99
LINC00173-202ENST00000477702 NSD2O96028 1365 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 NFAT5O94916 1531 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 ANKRD24Q8TF21 1146 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 SPSB2Q99619 263 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 BCS1LQ9Y276 419 aa8.87□□□□□ -0.99
LINC00173-202ENST00000477702 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
LINC00173-202ENST00000477702 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
LINC00173-202ENST00000477702 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
LINC00173-202ENST00000477702 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
LINC00173-202ENST00000477702 LY75O60449 1722 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 CICQ96RK0 1608 aaPredicted RBP8.85□□□□□ -0.99
LINC00173-202ENST00000477702 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 USP17L8P0C7I0 530 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 MCM6Q14566 821 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 TMEM259Q4ZIN3 620 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 LRRN4Q8WUT4 740 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 RRAGCQ9HB90 399 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 USP47Q96K76 1375 aa8.85□□□□□ -0.99
LINC00173-202ENST00000477702 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
LINC00173-202ENST00000477702 NBPF1Q3BBV0 1214 aa8.84□□□□□ -0.99
LINC00173-202ENST00000477702 LTV1Q96GA3 475 aaPredicted RBP8.84□□□□□ -0.99
LINC00173-202ENST00000477702 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
LINC00173-202ENST00000477702 QRICH2Q9H0J4 1663 aa8.84□□□□□ -0.99
LINC00173-202ENST00000477702 KCPQ6ZWJ8 1503 aa8.84□□□□□ -0.99
LINC00173-202ENST00000477702 CENPJQ9HC77 1338 aaPredicted RBP8.83□□□□□ -1
LINC00173-202ENST00000477702 DOT1LQ8TEK3 1739 aa8.83□□□□□ -1
LINC00173-202ENST00000477702 ADH1BP00325 375 aa8.83□□□□□ -1
LINC00173-202ENST00000477702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00173-202ENST00000477702 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
LINC00173-202ENST00000477702 SMC1BQ8NDV3 1235 aa8.83□□□□□ -1
LINC00173-202ENST00000477702 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
LINC00173-202ENST00000477702 TTC21AQ8NDW8 1320 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 KDM2BQ8NHM5 1336 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
LINC00173-202ENST00000477702 S1PR4O95977 384 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 MMP10P09238 476 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 JUNDP17535 347 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 MSS51Q4VC12 460 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 NME9Q86XW9 330 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 BANK1Q8NDB2 785 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 HELBQ8NG08 1087 aaPredicted RBP8.81□□□□□ -1
LINC00173-202ENST00000477702 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
LINC00173-202ENST00000477702 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 C5P01031 1676 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 USP54Q70EL1 1684 aa8.81□□□□□ -1
LINC00173-202ENST00000477702 FOXN1O15353 648 aa8.8□□□□□ -1
LINC00173-202ENST00000477702 DPEP1P16444 411 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms