RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TTC41PQ6P2S7 1318 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 SPATA31A7Q8IWB4 1347 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 SALL3Q9BXA9 1300 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 USP42Q9H9J4 1324 aaKnown RBP9.75□□□□□ -0.85
VMA21-203ENST00000477649 ERC2O15083 957 aa9.74□□□□□ -0.85
VMA21-203ENST00000477649 GSPT1P15170 499 aaKnown RBP9.74□□□□□ -0.85
VMA21-203ENST00000477649 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
VMA21-203ENST00000477649 RABL6Q3YEC7 729 aaPredicted RBP9.74□□□□□ -0.85
VMA21-203ENST00000477649 TBC1D9Q6ZT07 1266 aa9.74□□□□□ -0.85
VMA21-203ENST00000477649 PIGBQ92521 554 aa9.74□□□□□ -0.85
VMA21-203ENST00000477649 MYD88Q99836 296 aa9.74□□□□□ -0.85
VMA21-203ENST00000477649 USP35Q9P2H5 1018 aa9.74□□□□□ -0.85
VMA21-203ENST00000477649 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 NBPF26B4DH59 902 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 SDSP20132 328 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 G3BP1Q13283 466 aaKnown RBP eCLIP9.73□□□□□ -0.85
VMA21-203ENST00000477649 OS9Q13438 667 aaPredicted RBP9.73□□□□□ -0.85
VMA21-203ENST00000477649 CWF19L2Q2TBE0 894 aaKnown RBP9.73□□□□□ -0.85
VMA21-203ENST00000477649 IER5LQ5T953 404 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 NBPF14Q5TI25 921 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 NBPF10Q6P3W6 841 aaKnown RBP9.73□□□□□ -0.85
VMA21-203ENST00000477649 KIF6Q6ZMV9 814 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 NBPF15Q8N660 670 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 SMARCC1Q92922 1105 aaPredicted RBP9.73□□□□□ -0.85
VMA21-203ENST00000477649 ATG3Q9NT62 314 aa9.73□□□□□ -0.85
VMA21-203ENST00000477649 CWC25Q9NXE8 425 aaPredicted RBP9.73□□□□□ -0.85
VMA21-203ENST00000477649 WNK3Q9BYP7 1800 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 TTLL13PA6NNM8 815 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 H7C1W4 665 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
VMA21-203ENST00000477649 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
VMA21-203ENST00000477649 GLRX3O76003 335 aaKnown RBP9.72□□□□□ -0.85
VMA21-203ENST00000477649 ADAMTS2O95450 1211 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 VPS72Q15906 364 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 C16orf71Q8IYS4 520 aaPredicted RBP9.72□□□□□ -0.85
VMA21-203ENST00000477649 SNX21Q969T3 373 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 COPRSQ9NQ92 184 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 FBXO3Q9UK99 471 aa9.72□□□□□ -0.85
VMA21-203ENST00000477649 A0A087WZG4 1122 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 RGL2O15211 777 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 MYT1Q01538 1121 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 TCIRG1Q13488 830 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 FNBP4Q8N3X1 1017 aaPredicted RBP9.71□□□□□ -0.86
VMA21-203ENST00000477649 SUCLG2Q96I99 432 aa9.71□□□□□ -0.86
VMA21-203ENST00000477649 BICC1Q9H694 974 aaKnown RBP9.71□□□□□ -0.86
VMA21-203ENST00000477649 APBB1O00213 710 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 HIP1O00291 1037 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 A1BGP04217 495 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 IFIT2P09913 472 aaKnown RBP9.7□□□□□ -0.86
VMA21-203ENST00000477649 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
VMA21-203ENST00000477649 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
VMA21-203ENST00000477649 CNTROBQ8N137 903 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 KAZALD1Q96I82 304 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
VMA21-203ENST00000477649 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 CYP19A1P11511 503 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 MCCP23508 829 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 CASP7P55210 303 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 RABEP1Q15276 862 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 MAP3K15Q6ZN16 1313 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 DNAJC10Q8IXB1 793 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 RUFY2Q8WXA3 655 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 AK7Q96M32 723 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 PLA2G12BQ9BX93 195 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 ECHDC1Q9NTX5 307 aa9.69□□□□□ -0.86
VMA21-203ENST00000477649 RGS17Q9UGC6 210 aaPredicted RBP9.69□□□□□ -0.86
VMA21-203ENST00000477649 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 CICQ96RK0 1608 aaPredicted RBP9.68□□□□□ -0.86
VMA21-203ENST00000477649 MAP3K13O43283 966 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 PCCAP05165 728 aaPredicted RBP9.68□□□□□ -0.86
VMA21-203ENST00000477649 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
VMA21-203ENST00000477649 ANAPC15P60006 121 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
VMA21-203ENST00000477649 TTLL7Q6ZT98 887 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 UBE3BQ7Z3V4 1068 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 GPR108Q9NPR9 543 aa9.68□□□□□ -0.86
VMA21-203ENST00000477649 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
VMA21-203ENST00000477649 CDHR2Q9BYE9 1310 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 TRIM6-TRIM34B2RNG4 842 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 CIAO1O76071 339 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 PI4K2BQ8TCG2 481 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 EVI5LQ96CN4 794 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 IL17RAQ96F46 866 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 IL1RAPL2Q9NP60 686 aa9.67□□□□□ -0.86
VMA21-203ENST00000477649 ITGB4P16144 1822 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 NUP188Q5SRE5 1749 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms