RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 GPS2Q13227 327 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 ITFG2Q969R8 447 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 AK9Q5TCS8 1911 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 PLEKHG2Q9H7P9 1386 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 SYCE3A1L190 88 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 LIG1P18858 919 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 ARHGEF25Q86VW2 580 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
RTFDC1-207ENST00000477573 TRIM66O15016 1216 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 MAGEA9P43362 315 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 RBM6P78332 1123 aaKnown RBP15□□□□□ -0.01
RTFDC1-207ENST00000477573 RNF20Q5VTR2 975 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 CRB1P82279 1406 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
RTFDC1-207ENST00000477573 KMT5BQ4FZB7 885 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 DNAJC21Q5F1R6 531 aaKnown RBP15□□□□□ -0.01
RTFDC1-207ENST00000477573 MCTP2Q6DN12 878 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 KRBA2Q6ZNG9 492 aa15□□□□□ -0.01
RTFDC1-207ENST00000477573 TACO1Q9BSH4 297 aaKnown RBP15□□□□□ -0.01
RTFDC1-207ENST00000477573 MAP2K2P36507 400 aa14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 TPM4P67936 248 aa14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 SYAP1Q96A49 352 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 V9GYY5 206 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-207ENST00000477573 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 IQUBQ8NA54 791 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 ANKRD20A12PQ8NF67 263 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 FAM210AQ96ND0 272 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 RRP15Q9Y3B9 282 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 C17orf53Q8N3J3 647 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 PCDHB15Q9Y5E8 787 aa14.98□□□□□ -0.01
RTFDC1-207ENST00000477573 ZSCAN26Q16670 478 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 MPNDQ8N594 471 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 NBPF3Q9H094 633 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
RTFDC1-207ENST00000477573 ANAPC15P60006 121 aa14.96□□□□□ -0.01
RTFDC1-207ENST00000477573 RNF214Q8ND24 703 aa14.96□□□□□ -0.01
RTFDC1-207ENST00000477573 FBXO18Q8NFZ0 1043 aa14.96□□□□□ -0.01
RTFDC1-207ENST00000477573 MRVI1Q9Y6F6 885 aa14.96□□□□□ -0.01
RTFDC1-207ENST00000477573 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 TPRNQ4KMQ1 711 aa14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 PPM1EQ8WY54 764 aa14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 ZBTB40Q9NUA8 1239 aa14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 RBM27Q9P2N5 1060 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-207ENST00000477573 LRRC37A3O60309 1634 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 MAFGO15525 162 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 HDAC1Q13547 482 aaPredicted RBP14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 SART3Q15020 963 aaKnown RBP14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 PACS2Q86VP3 889 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 CALR3Q96L12 384 aaKnown RBP14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 LCMT1Q9UIC8 334 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 ABCC4O15439 1325 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 ADCY5O95622 1261 aa14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 PLEKHO1Q53GL0 409 aaPredicted RBP14.94□□□□□ -0.02
RTFDC1-207ENST00000477573 PTPRCP08575 1304 aa14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 PRPF40AO75400 957 aaKnown RBP14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 MMS22LQ6ZRQ5 1243 aa14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
RTFDC1-207ENST00000477573 BIRC2Q13490 618 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 USP25Q9UHP3 1055 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 CPP00450 1065 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 MAP9Q49MG5 647 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 ST7Q9NRC1 585 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 PSD3Q9NYI0 1048 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
RTFDC1-207ENST00000477573 IVLP07476 585 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 TNNT1P13805 278 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 FBXO38Q6PIJ6 1188 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 IL17REQ8NFR9 667 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 MIS18AQ9NYP9 233 aa14.91□□□□□ -0.02
RTFDC1-207ENST00000477573 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms