RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
TRAIP-206ENST00000477546 GRIPAP1Q4V328 841 aa14.19□□□□□ -0.14
TRAIP-206ENST00000477546 FBXO46Q6PJ61 603 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-206ENST00000477546 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
TRAIP-206ENST00000477546 CSRNP1Q96S65 589 aa14.19□□□□□ -0.14
TRAIP-206ENST00000477546 MKI67P46013 3256 aaKnown RBP14.19□□□□□ -0.14
TRAIP-206ENST00000477546 CDHR2Q9BYE9 1310 aa14.18□□□□□ -0.14
TRAIP-206ENST00000477546 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
TRAIP-206ENST00000477546 ZNF157P51786 506 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-206ENST00000477546 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
TRAIP-206ENST00000477546 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-206ENST00000477546 SLC10A3P09131 477 aa14.17□□□□□ -0.14
TRAIP-206ENST00000477546 HIRAP54198 1017 aaPredicted RBP14.17□□□□□ -0.14
TRAIP-206ENST00000477546 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAIP-206ENST00000477546 CLEC4GQ6UXB4 293 aa14.17□□□□□ -0.14
TRAIP-206ENST00000477546 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
TRAIP-206ENST00000477546 C2orf69Q8N8R5 385 aa14.17□□□□□ -0.14
TRAIP-206ENST00000477546 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
TRAIP-206ENST00000477546 GBA2Q9HCG7 927 aaPredicted RBP14.17□□□□□ -0.14
TRAIP-206ENST00000477546 NPC1L1Q9UHC9 1359 aa14.17□□□□□ -0.14
TRAIP-206ENST00000477546 GMPSP49915 693 aaPredicted RBP14.16□□□□□ -0.14
TRAIP-206ENST00000477546 USP48Q86UV5 1035 aa14.16□□□□□ -0.14
TRAIP-206ENST00000477546 DZIP3Q86Y13 1208 aaKnown RBP14.16□□□□□ -0.14
TRAIP-206ENST00000477546 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
TRAIP-206ENST00000477546 ZNF296Q8WUU4 475 aaPredicted RBP14.16□□□□□ -0.14
TRAIP-206ENST00000477546 COLQQ9Y215 455 aaPredicted RBP14.16□□□□□ -0.14
TRAIP-206ENST00000477546 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
TRAIP-206ENST00000477546 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
TRAIP-206ENST00000477546 CXCL9Q07325 125 aa14.15□□□□□ -0.14
TRAIP-206ENST00000477546 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
TRAIP-206ENST00000477546 TRPM4Q8TD43 1214 aa14.15□□□□□ -0.14
TRAIP-206ENST00000477546 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
TRAIP-206ENST00000477546 HEG1Q9ULI3 1381 aa14.14□□□□□ -0.15
TRAIP-206ENST00000477546 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
TRAIP-206ENST00000477546 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
TRAIP-206ENST00000477546 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
TRAIP-206ENST00000477546 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
TRAIP-206ENST00000477546 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
TRAIP-206ENST00000477546 NOM1Q5C9Z4 860 aaKnown RBP14.13□□□□□ -0.15
TRAIP-206ENST00000477546 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
TRAIP-206ENST00000477546 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
TRAIP-206ENST00000477546 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
TRAIP-206ENST00000477546 POTEFA5A3E0 1075 aa14.12□□□□□ -0.15
TRAIP-206ENST00000477546 A1BGP04217 495 aa14.12□□□□□ -0.15
TRAIP-206ENST00000477546 DLK2Q6UY11 383 aa14.12□□□□□ -0.15
TRAIP-206ENST00000477546 KRT26Q7Z3Y9 468 aa14.12□□□□□ -0.15
TRAIP-206ENST00000477546 ZNRF3Q9ULT6 936 aa14.12□□□□□ -0.15
TRAIP-206ENST00000477546 RGL2O15211 777 aa14.11□□□□□ -0.15
TRAIP-206ENST00000477546 AOC3Q16853 763 aa14.11□□□□□ -0.15
TRAIP-206ENST00000477546 INTS3Q68E01 1043 aaKnown RBP14.11□□□□□ -0.15
TRAIP-206ENST00000477546 BCL2L13Q9BXK5 485 aa14.11□□□□□ -0.15
TRAIP-206ENST00000477546 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAIP-206ENST00000477546 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
TRAIP-206ENST00000477546 RASAL3Q86YV0 1011 aa14.1□□□□□ -0.15
TRAIP-206ENST00000477546 SZT2Q5T011 3432 aa14.09□□□□□ -0.15
TRAIP-206ENST00000477546 GPR25O00155 361 aa14.09□□□□□ -0.15
TRAIP-206ENST00000477546 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
TRAIP-206ENST00000477546 HOXA10P31260 410 aaPredicted RBP14.09□□□□□ -0.15
TRAIP-206ENST00000477546 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
TRAIP-206ENST00000477546 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
TRAIP-206ENST00000477546 KIF7Q2M1P5 1343 aa14.09□□□□□ -0.15
TRAIP-206ENST00000477546 RIC1Q4ADV7 1423 aa14.08□□□□□ -0.15
TRAIP-206ENST00000477546 A0A0C4DFX4 3053 aa14.08□□□□□ -0.16
TRAIP-206ENST00000477546 H7C1D1 291 aa14.08□□□□□ -0.16
TRAIP-206ENST00000477546 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.16
TRAIP-206ENST00000477546 MNX1P50219 401 aaPredicted RBP14.08□□□□□ -0.16
TRAIP-206ENST00000477546 TNIP1Q15025 636 aa14.08□□□□□ -0.16
TRAIP-206ENST00000477546 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
TRAIP-206ENST00000477546 SHTN1A0MZ66 631 aa14.07□□□□□ -0.16
TRAIP-206ENST00000477546 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
TRAIP-206ENST00000477546 PPEF1O14829 653 aaPredicted RBP14.07□□□□□ -0.16
TRAIP-206ENST00000477546 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
TRAIP-206ENST00000477546 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
TRAIP-206ENST00000477546 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
TRAIP-206ENST00000477546 ADM5C9JUS6 153 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 RAD17O75943 681 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 SUPT20HQ8NEM7 779 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
TRAIP-206ENST00000477546 FMNL2Q96PY5 1086 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 PITPNM2Q9BZ72 1349 aa14.06□□□□□ -0.16
TRAIP-206ENST00000477546 FKTNO75072 461 aa14.05□□□□□ -0.16
TRAIP-206ENST00000477546 IL13P35225 146 aa14.05□□□□□ -0.16
TRAIP-206ENST00000477546 RTFDC1Q9BY42 306 aaPredicted RBP14.05□□□□□ -0.16
TRAIP-206ENST00000477546 SAMD7Q7Z3H4 446 aa14.04□□□□□ -0.16
TRAIP-206ENST00000477546 DPF2Q92785 391 aa14.04□□□□□ -0.16
TRAIP-206ENST00000477546 NYXQ9GZU5 481 aa14.04□□□□□ -0.16
TRAIP-206ENST00000477546 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
TRAIP-206ENST00000477546 HTTP42858 3142 aa14.04□□□□□ -0.16
TRAIP-206ENST00000477546 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 EN2P19622 333 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 PIP4K2AP48426 406 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 KIAA2012Q0VF49 1180 aa14.03□□□□□ -0.16
TRAIP-206ENST00000477546 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 CFHR5Q9BXR6 569 aa14.03□□□□□ -0.16
TRAIP-206ENST00000477546 RBBP6Q7Z6E9 1792 aaKnown RBP14.03□□□□□ -0.16
TRAIP-206ENST00000477546 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.16
TRAIP-206ENST00000477546 H0YGN5 161 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms