RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 SASH1O94885 1247 aa17.27■□□□□ 0.36
GGA1-218ENST00000475445 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
GGA1-218ENST00000475445 KCNB2Q92953 911 aa17.27■□□□□ 0.36
GGA1-218ENST00000475445 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.35
GGA1-218ENST00000475445 XAGE3Q8WTP9 111 aa17.27■□□□□ 0.35
GGA1-218ENST00000475445 CPDO75976 1380 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 COL15A1P39059 1388 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 ARFGEF2Q9Y6D5 1785 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 ESPNB1AK53 854 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 GCKRQ14397 625 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
GGA1-218ENST00000475445 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
GGA1-218ENST00000475445 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
GGA1-218ENST00000475445 TRIM44Q96DX7 344 aaPredicted RBP17.25■□□□□ 0.35
GGA1-218ENST00000475445 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
GGA1-218ENST00000475445 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
GGA1-218ENST00000475445 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
GGA1-218ENST00000475445 SNRKQ9NRH2 765 aa17.25■□□□□ 0.35
GGA1-218ENST00000475445 MYL6BP14649 208 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 AK2P54819 239 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
GGA1-218ENST00000475445 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
GGA1-218ENST00000475445 GLI3P10071 1580 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 TOM1O60784 492 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 MYD88Q99836 296 aa17.24■□□□□ 0.35
GGA1-218ENST00000475445 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
GGA1-218ENST00000475445 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
GGA1-218ENST00000475445 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
GGA1-218ENST00000475445 CCDC171Q6TFL3 1326 aa17.23■□□□□ 0.35
GGA1-218ENST00000475445 CYP27B1O15528 508 aa17.23■□□□□ 0.35
GGA1-218ENST00000475445 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
GGA1-218ENST00000475445 RPAP1Q9BWH6 1393 aaPredicted RBP17.23■□□□□ 0.35
GGA1-218ENST00000475445 PTH1RQ03431 593 aa17.22■□□□□ 0.35
GGA1-218ENST00000475445 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
GGA1-218ENST00000475445 COPRSQ9NQ92 184 aa17.22■□□□□ 0.35
GGA1-218ENST00000475445 CASTP20810 708 aaKnown RBP17.22■□□□□ 0.35
GGA1-218ENST00000475445 CABLES1Q8TDN4 633 aa17.22■□□□□ 0.35
GGA1-218ENST00000475445 ZSCAN31Q96LW9 406 aaPredicted RBP17.22■□□□□ 0.35
GGA1-218ENST00000475445 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 LRSAM1Q6UWE0 723 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 ZSWIM6Q9HCJ5 1215 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 TMEM63CQ9P1W3 806 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 ERBB4Q15303 1308 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 TERF1P54274 439 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
GGA1-218ENST00000475445 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
GGA1-218ENST00000475445 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
GGA1-218ENST00000475445 RBM27Q9P2N5 1060 aaKnown RBP17.21■□□□□ 0.35
GGA1-218ENST00000475445 USP16Q9Y5T5 823 aa17.21■□□□□ 0.35
GGA1-218ENST00000475445 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 BRD2P25440 801 aaKnown RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 CHAMP1Q96JM3 812 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 CABP4P57796 275 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 DMTNQ08495 405 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 TMEM87AQ8NBN3 555 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 MAP4K1Q92918 833 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
GGA1-218ENST00000475445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
GGA1-218ENST00000475445 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
GGA1-218ENST00000475445 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 SIL1Q9H173 461 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 TMEM51Q9NW97 253 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
GGA1-218ENST00000475445 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
GGA1-218ENST00000475445 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
GGA1-218ENST00000475445 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 TCHHQ07283 1943 aa17.19■□□□□ 0.34
GGA1-218ENST00000475445 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
GGA1-218ENST00000475445 RBSNQ9H1K0 784 aa17.18■□□□□ 0.34
GGA1-218ENST00000475445 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
GGA1-218ENST00000475445 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
GGA1-218ENST00000475445 JCADQ9P266 1359 aa17.18■□□□□ 0.34
GGA1-218ENST00000475445 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
GGA1-218ENST00000475445 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
GGA1-218ENST00000475445 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
GGA1-218ENST00000475445 PSMA5P28066 241 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 CREB3L3Q68CJ9 461 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 ATP6V1DQ9Y5K8 247 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 STX6O43752 255 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
GGA1-218ENST00000475445 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms