RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
HIF3A-207ENST00000475432 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
HIF3A-207ENST00000475432 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
HIF3A-207ENST00000475432 RAB11FIP3O75154 756 aa22.37■■□□□ 1.17
HIF3A-207ENST00000475432 FOXO4P98177 505 aa22.37■■□□□ 1.17
HIF3A-207ENST00000475432 C16orf71Q8IYS4 520 aaPredicted RBP22.36■■□□□ 1.17
HIF3A-207ENST00000475432 FAM89AQ96GI7 184 aa22.36■■□□□ 1.17
HIF3A-207ENST00000475432 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
HIF3A-207ENST00000475432 HSP90AB4PQ58FF6 505 aa22.36■■□□□ 1.17
HIF3A-207ENST00000475432 SLC27A3Q5K4L6 730 aa22.36■■□□□ 1.17
HIF3A-207ENST00000475432 BACH2Q9BYV9 841 aa22.36■■□□□ 1.17
HIF3A-207ENST00000475432 PA2G4Q9UQ80 394 aaKnown RBP22.36■■□□□ 1.17
HIF3A-207ENST00000475432 FAM161AQ3B820 660 aa22.35■■□□□ 1.17
HIF3A-207ENST00000475432 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
HIF3A-207ENST00000475432 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
HIF3A-207ENST00000475432 RTCBQ9Y3I0 505 aaKnown RBP22.35■■□□□ 1.17
HIF3A-207ENST00000475432 PLEKHM2Q8IWE5 1019 aa22.35■■□□□ 1.17
HIF3A-207ENST00000475432 C8orf34Q49A92 452 aa22.34■■□□□ 1.17
HIF3A-207ENST00000475432 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
HIF3A-207ENST00000475432 OTUD7AQ8TE49 926 aaPredicted RBP22.34■■□□□ 1.17
HIF3A-207ENST00000475432 ZNF652Q9Y2D9 606 aa22.34■■□□□ 1.17
HIF3A-207ENST00000475432 RHPN1Q8TCX5 695 aa22.33■■□□□ 1.17
HIF3A-207ENST00000475432 TRMT112Q9UI30 125 aaKnown RBP22.33■■□□□ 1.17
HIF3A-207ENST00000475432 NUP98P52948 1817 aa22.33■■□□□ 1.17
HIF3A-207ENST00000475432 AMIGO3Q86WK7 504 aa22.33■■□□□ 1.16
HIF3A-207ENST00000475432 KIF1BPQ96EK5 621 aa22.33■■□□□ 1.16
HIF3A-207ENST00000475432 CDHR2Q9BYE9 1310 aa22.33■■□□□ 1.16
HIF3A-207ENST00000475432 C4BP0C0L5 1744 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 ANKRD36CQ5JPF3 1778 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 RFX5P48382 616 aaPredicted RBP22.32■■□□□ 1.16
HIF3A-207ENST00000475432 OS9Q13438 667 aaPredicted RBP22.32■■□□□ 1.16
HIF3A-207ENST00000475432 SYNE4Q8N205 404 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 AK7Q96M32 723 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 PLA2G12BQ9BX93 195 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
HIF3A-207ENST00000475432 RGL2O15211 777 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 KLHDC4Q8TBB5 520 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 NARFQ9UHQ1 456 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 NIP7Q9Y221 180 aaKnown RBP eCLIP22.31■■□□□ 1.16
HIF3A-207ENST00000475432 PROM2Q8N271 834 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 IL1RAPL2Q9NP60 686 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
HIF3A-207ENST00000475432 PLSCR1O15162 318 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
HIF3A-207ENST00000475432 TXNRD1Q16881 649 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 SUSD4Q5VX71 490 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 CHMP3Q9Y3E7 222 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 APBA3O96018 575 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 G3BP1Q13283 466 aaKnown RBP eCLIP22.3■■□□□ 1.16
HIF3A-207ENST00000475432 ERC1Q8IUD2 1116 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 ARHGEF1Q92888 912 aaKnown RBP22.3■■□□□ 1.16
HIF3A-207ENST00000475432 SIL1Q9H173 461 aa22.3■■□□□ 1.16
HIF3A-207ENST00000475432 RBM19Q9Y4C8 960 aaKnown RBP22.3■■□□□ 1.16
HIF3A-207ENST00000475432 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
HIF3A-207ENST00000475432 BCORQ6W2J9 1755 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 IRS4O14654 1257 aaPredicted RBP22.28■■□□□ 1.16
HIF3A-207ENST00000475432 ZPR1O75312 459 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 BMP2KLQ5H9B9 411 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
HIF3A-207ENST00000475432 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 SRP68Q9UHB9 627 aaKnown RBP22.28■■□□□ 1.16
HIF3A-207ENST00000475432 SALL3Q9BXA9 1300 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 PHF14O94880 888 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
HIF3A-207ENST00000475432 SH3TC1Q8TE82 1336 aa22.27■■□□□ 1.15
HIF3A-207ENST00000475432 FAM177BA6PVY3 158 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 SASH1O94885 1247 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 CSF1RP07333 972 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 NTSR2O95665 410 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 ADRA2BP18089 450 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 PDE1AP54750 535 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 OSBPL3Q9H4L5 887 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
HIF3A-207ENST00000475432 MX1P20591 662 aa22.25■■□□□ 1.15
HIF3A-207ENST00000475432 HMGB2P26583 209 aaKnown RBP22.25■■□□□ 1.15
HIF3A-207ENST00000475432 RFC4P35249 363 aa22.25■■□□□ 1.15
HIF3A-207ENST00000475432 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
HIF3A-207ENST00000475432 TTC22Q5TAA0 569 aa22.24■■□□□ 1.15
HIF3A-207ENST00000475432 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
HIF3A-207ENST00000475432 USP42Q9H9J4 1324 aaKnown RBP22.24■■□□□ 1.15
HIF3A-207ENST00000475432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.24■■□□□ 1.15
HIF3A-207ENST00000475432 PDE8AO60658 829 aa22.24■■□□□ 1.15
HIF3A-207ENST00000475432 CTSWP56202 376 aa22.24■■□□□ 1.15
HIF3A-207ENST00000475432 CLASRPQ8N2M8 674 aaKnown RBP22.24■■□□□ 1.15
HIF3A-207ENST00000475432 TTLL11Q8NHH1 800 aa22.24■■□□□ 1.15
HIF3A-207ENST00000475432 CCDC57Q2TAC2 916 aa22.23■■□□□ 1.15
HIF3A-207ENST00000475432 BICDL1Q6ZP65 573 aa22.23■■□□□ 1.15
HIF3A-207ENST00000475432 NUTM1Q86Y26 1132 aa22.23■■□□□ 1.15
HIF3A-207ENST00000475432 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
HIF3A-207ENST00000475432 STAP2Q9UGK3 403 aa22.23■■□□□ 1.15
HIF3A-207ENST00000475432 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.23■■□□□ 1.15
HIF3A-207ENST00000475432 SSFA2P28290 1259 aa22.22■■□□□ 1.15
HIF3A-207ENST00000475432 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
HIF3A-207ENST00000475432 TSHZ3Q63HK5 1081 aa22.21■■□□□ 1.15
HIF3A-207ENST00000475432 ZNF594Q96JF6 807 aaPredicted RBP22.21■■□□□ 1.15
HIF3A-207ENST00000475432 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
HIF3A-207ENST00000475432 SETDB2Q96T68 719 aa22.2■■□□□ 1.14
HIF3A-207ENST00000475432 GREM2Q9H772 168 aa22.2■■□□□ 1.14
HIF3A-207ENST00000475432 HSP90B1P14625 803 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms