RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
ATG4A-207ENST00000474825 LAMB4A4D0S4 1761 aa8.35□□□□□ -1.07
ATG4A-207ENST00000474825 UTYO14607 1347 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 ALDH1L1O75891 902 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 STARD3NLO95772 234 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 ANXA1P04083 346 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 RPAP2Q8IXW5 612 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 USP44Q9H0E7 712 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 RWDD1Q9H446 243 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 N4BP2Q86UW6 1770 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-207ENST00000474825 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
ATG4A-207ENST00000474825 KCNQ2O43526 872 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 GNAI3P08754 354 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-207ENST00000474825 ANKRD13DQ6ZTN6 518 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 COPS6Q7L5N1 327 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 DNAJC10Q8IXB1 793 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 LINS1Q8NG48 757 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 PLBD2Q8NHP8 589 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 XAGE3Q8WTP9 111 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 MEIS3Q99687 375 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-207ENST00000474825 SRCIN1Q9C0H9 1055 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 COL15A1P39059 1388 aa8.33□□□□□ -1.08
ATG4A-207ENST00000474825 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
ATG4A-207ENST00000474825 A1BGP04217 495 aa8.32□□□□□ -1.08
ATG4A-207ENST00000474825 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
ATG4A-207ENST00000474825 SIK1P57059 783 aa8.32□□□□□ -1.08
ATG4A-207ENST00000474825 MAP3K2Q9Y2U5 619 aa8.32□□□□□ -1.08
ATG4A-207ENST00000474825 RREB1Q92766 1687 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 RGL2O15211 777 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 GNAI2P04899 355 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 IL6STP40189 918 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-207ENST00000474825 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
ATG4A-207ENST00000474825 TRIM28Q13263 835 aaKnown RBP8.31□□□□□ -1.08
ATG4A-207ENST00000474825 MTX1Q13505 466 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 INTS5Q6P9B9 1019 aaKnown RBP8.31□□□□□ -1.08
ATG4A-207ENST00000474825 SLC4A10Q6U841 1118 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 PALLDQ8WX93 1383 aa8.31□□□□□ -1.08
ATG4A-207ENST00000474825 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 TJP1Q07157 1748 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 MYL6BP14649 208 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 BAG6P46379 1132 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 ATP8B2P98198 1209 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 ITPK1Q13572 414 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
ATG4A-207ENST00000474825 GPR153Q6NV75 609 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 TTLL7Q6ZT98 887 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-207ENST00000474825 GCC1Q96CN9 775 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-207ENST00000474825 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 HDAC5Q9UQL6 1122 aa8.3□□□□□ -1.08
ATG4A-207ENST00000474825 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 ERVV-1B6SEH8 477 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 GRM8O00222 908 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 CASP7P55210 303 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 GCKRQ14397 625 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 FAM196AQ6ZSG2 479 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 PTF1AQ7RTS3 328 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 ISCA1Q9BUE6 129 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
ATG4A-207ENST00000474825 EP400Q96L91 3159 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 H7C1W4 665 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-207ENST00000474825 UBTFL1P0CB47 393 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-207ENST00000474825 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 PIP4K2AP48426 406 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-207ENST00000474825 NUCB1Q02818 461 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 NEXNQ0ZGT2 675 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
ATG4A-207ENST00000474825 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 SSH3Q8TE77 659 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 KAZALD1Q96I82 304 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 C1orf115Q9H7X2 142 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 ZBTB1Q9Y2K1 713 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 MAP3K15Q6ZN16 1313 aa8.28□□□□□ -1.08
ATG4A-207ENST00000474825 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
ATG4A-207ENST00000474825 CWF19L2Q2TBE0 894 aaKnown RBP8.27□□□□□ -1.09
ATG4A-207ENST00000474825 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.09
ATG4A-207ENST00000474825 GIGYF2Q6Y7W6 1299 aaKnown RBP8.27□□□□□ -1.09
ATG4A-207ENST00000474825 DEFB132Q7Z7B7 95 aa8.27□□□□□ -1.09
ATG4A-207ENST00000474825 MYD88Q99836 296 aa8.27□□□□□ -1.09
ATG4A-207ENST00000474825 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
ATG4A-207ENST00000474825 COL5A3P25940 1745 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-207ENST00000474825 NUP188Q5SRE5 1749 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms