RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ERVV-2B6SEH9 535 aa25.66■■□□□ 1.7
SH3D21-202ENST00000474766 LRRCC1Q9C099 1032 aa25.66■■□□□ 1.7
SH3D21-202ENST00000474766 TMOD3Q9NYL9 352 aa25.65■■□□□ 1.7
SH3D21-202ENST00000474766 MRC1P22897 1456 aa25.65■■□□□ 1.7
SH3D21-202ENST00000474766 CCDC39Q9UFE4 941 aa25.64■■□□□ 1.7
SH3D21-202ENST00000474766 REC8O95072 547 aa25.64■■□□□ 1.69
SH3D21-202ENST00000474766 CHMP4AQ9BY43 222 aa25.64■■□□□ 1.69
SH3D21-202ENST00000474766 LRRFIP2Q9Y608 721 aaKnown RBP25.64■■□□□ 1.69
SH3D21-202ENST00000474766 TUBGCP6Q96RT7 1819 aa25.64■■□□□ 1.69
SH3D21-202ENST00000474766 PHAXQ9H814 394 aaKnown RBP25.63■■□□□ 1.69
SH3D21-202ENST00000474766 UQCRHLA0A096LP55 91 aa25.63■■□□□ 1.69
SH3D21-202ENST00000474766 UQCRHP07919 91 aa25.63■■□□□ 1.69
SH3D21-202ENST00000474766 ERC2O15083 957 aa25.62■■□□□ 1.69
SH3D21-202ENST00000474766 TXNRD1Q16881 649 aa25.62■■□□□ 1.69
SH3D21-202ENST00000474766 LRSAM1Q6UWE0 723 aa25.62■■□□□ 1.69
SH3D21-202ENST00000474766 NCLP19338 710 aaKnown RBP25.61■■□□□ 1.69
SH3D21-202ENST00000474766 CABP4P57796 275 aa25.61■■□□□ 1.69
SH3D21-202ENST00000474766 RBM10P98175 930 aaKnown RBP25.61■■□□□ 1.69
SH3D21-202ENST00000474766 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
SH3D21-202ENST00000474766 SLC52A2Q9HAB3 445 aa25.61■■□□□ 1.69
SH3D21-202ENST00000474766 PRDM4Q9UKN5 801 aa25.61■■□□□ 1.69
SH3D21-202ENST00000474766 SIPA1L3O60292 1781 aaPredicted RBP25.61■■□□□ 1.69
SH3D21-202ENST00000474766 UBTFL1P0CB47 393 aaPredicted RBP25.61■■□□□ 1.69
SH3D21-202ENST00000474766 STAP2Q9UGK3 403 aa25.61■■□□□ 1.69
SH3D21-202ENST00000474766 SASS6Q6UVJ0 657 aa25.6■■□□□ 1.69
SH3D21-202ENST00000474766 SMAP1Q8IYB5 467 aaPredicted RBP25.6■■□□□ 1.69
SH3D21-202ENST00000474766 SSH3Q8TE77 659 aa25.6■■□□□ 1.69
SH3D21-202ENST00000474766 FAM13BQ9NYF5 915 aa25.6■■□□□ 1.69
SH3D21-202ENST00000474766 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
SH3D21-202ENST00000474766 PALLDQ8WX93 1383 aa25.6■■□□□ 1.69
SH3D21-202ENST00000474766 ST18O60284 1047 aa25.59■■□□□ 1.69
SH3D21-202ENST00000474766 MX1P20591 662 aa25.59■■□□□ 1.69
SH3D21-202ENST00000474766 SRCIN1Q9C0H9 1055 aa25.58■■□□□ 1.69
SH3D21-202ENST00000474766 LRRC4BQ9NT99 713 aa25.58■■□□□ 1.69
SH3D21-202ENST00000474766 MBD3O95983 291 aa25.58■■□□□ 1.68
SH3D21-202ENST00000474766 KCNQ4P56696 695 aa25.58■■□□□ 1.68
SH3D21-202ENST00000474766 TEFQ10587 303 aa25.58■■□□□ 1.68
SH3D21-202ENST00000474766 ATG3Q9NT62 314 aa25.58■■□□□ 1.68
SH3D21-202ENST00000474766 PAPPAQ13219 1627 aa25.58■■□□□ 1.68
SH3D21-202ENST00000474766 GPT2Q8TD30 523 aa25.57■■□□□ 1.68
SH3D21-202ENST00000474766 KCNQ3O43525 872 aa25.56■■□□□ 1.68
SH3D21-202ENST00000474766 EIF2S2P20042 333 aaKnown RBP25.56■■□□□ 1.68
SH3D21-202ENST00000474766 POLA2Q14181 598 aa25.56■■□□□ 1.68
SH3D21-202ENST00000474766 CHPF2Q9P2E5 772 aa25.56■■□□□ 1.68
SH3D21-202ENST00000474766 BTBD11A6QL63 1104 aa25.56■■□□□ 1.68
SH3D21-202ENST00000474766 AOX1Q06278 1338 aa25.56■■□□□ 1.68
SH3D21-202ENST00000474766 PRPF40AO75400 957 aaKnown RBP25.55■■□□□ 1.68
SH3D21-202ENST00000474766 AK9Q5TCS8 1911 aa25.55■■□□□ 1.68
SH3D21-202ENST00000474766 BEND3Q5T5X7 828 aa25.54■■□□□ 1.68
SH3D21-202ENST00000474766 SMARCC1Q92922 1105 aaPredicted RBP25.54■■□□□ 1.68
SH3D21-202ENST00000474766 TAF1LQ8IZX4 1826 aa25.54■■□□□ 1.68
SH3D21-202ENST00000474766 TSHZ3Q63HK5 1081 aa25.54■■□□□ 1.68
SH3D21-202ENST00000474766 DNAAF4Q8WXU2 420 aa25.54■■□□□ 1.68
SH3D21-202ENST00000474766 RAB11FIP3O75154 756 aa25.53■■□□□ 1.68
SH3D21-202ENST00000474766 C5P01031 1676 aa25.53■■□□□ 1.68
SH3D21-202ENST00000474766 HEG1Q9ULI3 1381 aa25.53■■□□□ 1.68
SH3D21-202ENST00000474766 ESYT1Q9BSJ8 1104 aa25.53■■□□□ 1.68
SH3D21-202ENST00000474766 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
SH3D21-202ENST00000474766 PPP1R42Q7Z4L9 355 aa25.52■■□□□ 1.68
SH3D21-202ENST00000474766 CCNL1Q9UK58 526 aaPredicted RBP25.52■■□□□ 1.68
SH3D21-202ENST00000474766 ZDHHC9Q9Y397 364 aa25.52■■□□□ 1.68
SH3D21-202ENST00000474766 PI4KAP2A4QPH2 592 aa25.51■■□□□ 1.67
SH3D21-202ENST00000474766 PKP1Q13835 747 aa25.51■■□□□ 1.67
SH3D21-202ENST00000474766 PI4KAP1Q8N8J0 262 aa25.51■■□□□ 1.67
SH3D21-202ENST00000474766 TMEM63CQ9P1W3 806 aa25.51■■□□□ 1.67
SH3D21-202ENST00000474766 SLC39A6Q13433 755 aa25.51■■□□□ 1.67
SH3D21-202ENST00000474766 ADCY9O60503 1353 aa25.5■■□□□ 1.67
SH3D21-202ENST00000474766 CHMLP26374 656 aa25.5■■□□□ 1.67
SH3D21-202ENST00000474766 UBR2Q8IWV8 1755 aa25.5■■□□□ 1.67
SH3D21-202ENST00000474766 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
SH3D21-202ENST00000474766 DBF4Q9UBU7 674 aaPredicted RBP25.49■■□□□ 1.67
SH3D21-202ENST00000474766 LOC102724428A0A0B4J2F2 783 aa25.49■■□□□ 1.67
SH3D21-202ENST00000474766 SIK1P57059 783 aa25.49■■□□□ 1.67
SH3D21-202ENST00000474766 RBM27Q9P2N5 1060 aaKnown RBP25.49■■□□□ 1.67
SH3D21-202ENST00000474766 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
SH3D21-202ENST00000474766 SLC4A9Q96Q91 983 aa25.48■■□□□ 1.67
SH3D21-202ENST00000474766 KCPQ6ZWJ8 1503 aa25.48■■□□□ 1.67
SH3D21-202ENST00000474766 GIGYF1O75420 1035 aaPredicted RBP25.47■■□□□ 1.67
SH3D21-202ENST00000474766 SURF6O75683 361 aaKnown RBP25.47■■□□□ 1.67
SH3D21-202ENST00000474766 MCM2P49736 904 aa25.47■■□□□ 1.67
SH3D21-202ENST00000474766 ZNF790Q6PG37 636 aa25.47■■□□□ 1.67
SH3D21-202ENST00000474766 IL17RAQ96F46 866 aa25.47■■□□□ 1.67
SH3D21-202ENST00000474766 SYCE3A1L190 88 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 PSDA5PKW4 1024 aaPredicted RBP25.46■■□□□ 1.67
SH3D21-202ENST00000474766 R3HDM1Q15032 1099 aaKnown RBP25.46■■□□□ 1.67
SH3D21-202ENST00000474766 ZGPATQ8N5A5 531 aaKnown RBP25.46■■□□□ 1.67
SH3D21-202ENST00000474766 TJP1Q07157 1748 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 SRGAP3O43295 1099 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 PTCD1O75127 700 aaKnown RBP25.46■■□□□ 1.67
SH3D21-202ENST00000474766 KIAA2012Q0VF49 1180 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 ZNF827Q17R98 1081 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 RHPN1Q8TCX5 695 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 SYAP1Q96A49 352 aaPredicted RBP25.46■■□□□ 1.67
SH3D21-202ENST00000474766 IL1RAPL2Q9NP60 686 aa25.46■■□□□ 1.67
SH3D21-202ENST00000474766 TRIM6-TRIM34B2RNG4 842 aa25.45■■□□□ 1.66
SH3D21-202ENST00000474766 ITPK1Q13572 414 aa25.45■■□□□ 1.66
SH3D21-202ENST00000474766 NBPF14Q5TI25 921 aa25.45■■□□□ 1.66
SH3D21-202ENST00000474766 EPB41L2O43491 1005 aaKnown RBP25.44■■□□□ 1.66
SH3D21-202ENST00000474766 ANXA1P04083 346 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 ANAPC15P60006 121 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms