RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SBF2Q86WG5 1849 aa24.37■■□□□ 1.49
SSR1-204ENST00000474597 MYH14Q7Z406 1995 aaKnown RBP24.37■■□□□ 1.49
SSR1-204ENST00000474597 CLASRPQ8N2M8 674 aaKnown RBP24.36■■□□□ 1.49
SSR1-204ENST00000474597 CHMP3Q9Y3E7 222 aa24.36■■□□□ 1.49
SSR1-204ENST00000474597 SALL3Q9BXA9 1300 aa24.36■■□□□ 1.49
SSR1-204ENST00000474597 LMBR1LQ6UX01 489 aa24.35■■□□□ 1.49
SSR1-204ENST00000474597 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
SSR1-204ENST00000474597 CDC45O75419 566 aa24.35■■□□□ 1.49
SSR1-204ENST00000474597 PCCAP05165 728 aaPredicted RBP24.34■■□□□ 1.49
SSR1-204ENST00000474597 GPTP24298 496 aa24.34■■□□□ 1.49
SSR1-204ENST00000474597 MFAP1P55081 439 aaKnown RBP24.34■■□□□ 1.49
SSR1-204ENST00000474597 FOXO4P98177 505 aa24.34■■□□□ 1.49
SSR1-204ENST00000474597 NUTM1Q86Y26 1132 aa24.34■■□□□ 1.49
SSR1-204ENST00000474597 SIL1Q9H173 461 aa24.34■■□□□ 1.49
SSR1-204ENST00000474597 ZBTB38Q8NAP3 1195 aaPredicted RBP24.33■■□□□ 1.49
SSR1-204ENST00000474597 STAP2Q9UGK3 403 aa24.33■■□□□ 1.49
SSR1-204ENST00000474597 AOX1Q06278 1338 aa24.33■■□□□ 1.49
SSR1-204ENST00000474597 IPO9Q96P70 1041 aaKnown RBP24.33■■□□□ 1.48
SSR1-204ENST00000474597 COPRSQ9NQ92 184 aa24.33■■□□□ 1.48
SSR1-204ENST00000474597 NLRP10Q86W26 655 aa24.32■■□□□ 1.48
SSR1-204ENST00000474597 LINC00116Q8NCU8 138 aa24.32■■□□□ 1.48
SSR1-204ENST00000474597 EIF5BO60841 1220 aaKnown RBP24.31■■□□□ 1.48
SSR1-204ENST00000474597 SDSP20132 328 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
SSR1-204ENST00000474597 CASC1Q6TDU7 716 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 TBC1D9Q6ZT07 1266 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 KLHDC4Q8TBB5 520 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 DDRGK1Q96HY6 314 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 RFX5P48382 616 aaPredicted RBP24.31■■□□□ 1.48
SSR1-204ENST00000474597 TSHZ3Q63HK5 1081 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 FAM89AQ96GI7 184 aa24.31■■□□□ 1.48
SSR1-204ENST00000474597 CNTNAP4Q9C0A0 1308 aa24.3■■□□□ 1.48
SSR1-204ENST00000474597 IFIT2P09913 472 aaKnown RBP24.3■■□□□ 1.48
SSR1-204ENST00000474597 PTPN12Q05209 780 aaKnown RBP24.3■■□□□ 1.48
SSR1-204ENST00000474597 BRWD3Q6RI45 1802 aa24.29■■□□□ 1.48
SSR1-204ENST00000474597 KCNQ4P56696 695 aa24.29■■□□□ 1.48
SSR1-204ENST00000474597 GPATCH3Q96I76 525 aa24.29■■□□□ 1.48
SSR1-204ENST00000474597 CCNL1Q9UK58 526 aaPredicted RBP24.29■■□□□ 1.48
SSR1-204ENST00000474597 SASH1O94885 1247 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 KRT27Q7Z3Y8 459 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 LY75O60449 1722 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 AACSQ86V21 672 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 TRMT112Q9UI30 125 aaKnown RBP24.28■■□□□ 1.48
SSR1-204ENST00000474597 TUBGCP6Q96RT7 1819 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 CDHR2Q9BYE9 1310 aa24.28■■□□□ 1.48
SSR1-204ENST00000474597 CAMTA2O94983 1202 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 FAM196AQ6ZSG2 479 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 TBC1D32Q96NH3 1257 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 PLA2G12BQ9BX93 195 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 BCL11BQ9C0K0 894 aaPredicted RBP24.27■■□□□ 1.48
SSR1-204ENST00000474597 ZNF652Q9Y2D9 606 aa24.27■■□□□ 1.48
SSR1-204ENST00000474597 TRIM6-TRIM34B2RNG4 842 aa24.26■■□□□ 1.47
SSR1-204ENST00000474597 RC3H1Q5TC82 1133 aaKnown RBP24.26■■□□□ 1.47
SSR1-204ENST00000474597 TTC41PQ6P2S7 1318 aa24.26■■□□□ 1.47
SSR1-204ENST00000474597 MYH3P11055 1940 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 ERC2O15083 957 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
SSR1-204ENST00000474597 CCDC57Q2TAC2 916 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 RILPL2Q969X0 211 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 C22orf23Q9BZE7 217 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 BCORQ6W2J9 1755 aa24.25■■□□□ 1.47
SSR1-204ENST00000474597 PARP10Q53GL7 1025 aa24.24■■□□□ 1.47
SSR1-204ENST00000474597 AK9Q5TCS8 1911 aa24.24■■□□□ 1.47
SSR1-204ENST00000474597 UBN2Q6ZU65 1347 aa24.24■■□□□ 1.47
SSR1-204ENST00000474597 USP42Q9H9J4 1324 aaKnown RBP24.24■■□□□ 1.47
SSR1-204ENST00000474597 TAF1LQ8IZX4 1826 aa24.24■■□□□ 1.47
SSR1-204ENST00000474597 IRS4O14654 1257 aaPredicted RBP24.23■■□□□ 1.47
SSR1-204ENST00000474597 GLRX3O76003 335 aaKnown RBP24.22■■□□□ 1.47
SSR1-204ENST00000474597 PI4K2BQ8TCG2 481 aa24.22■■□□□ 1.47
SSR1-204ENST00000474597 ECHDC1Q9NTX5 307 aa24.22■■□□□ 1.47
SSR1-204ENST00000474597 TAF7LQ5H9L4 462 aa24.21■■□□□ 1.47
SSR1-204ENST00000474597 EAF2Q96CJ1 260 aaPredicted RBP24.21■■□□□ 1.47
SSR1-204ENST00000474597 NIP7Q9Y221 180 aaKnown RBP eCLIP24.21■■□□□ 1.47
SSR1-204ENST00000474597 RPS6KA4O75676 772 aa24.21■■□□□ 1.47
SSR1-204ENST00000474597 TFCP2Q12800 502 aa24.21■■□□□ 1.47
SSR1-204ENST00000474597 CLEC4GQ6UXB4 293 aa24.21■■□□□ 1.47
SSR1-204ENST00000474597 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
SSR1-204ENST00000474597 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
SSR1-204ENST00000474597 CCDC8Q9H0W5 538 aaPredicted RBP24.21■■□□□ 1.47
SSR1-204ENST00000474597 GNPATO15228 680 aa24.2■■□□□ 1.46
SSR1-204ENST00000474597 PDE8AO60658 829 aa24.2■■□□□ 1.46
SSR1-204ENST00000474597 CSF1RP07333 972 aa24.2■■□□□ 1.46
SSR1-204ENST00000474597 IFIT5Q13325 482 aaKnown RBP24.2■■□□□ 1.46
SSR1-204ENST00000474597 SUSD4Q5VX71 490 aa24.2■■□□□ 1.46
SSR1-204ENST00000474597 SH3TC1Q8TE82 1336 aa24.19■■□□□ 1.46
SSR1-204ENST00000474597 IL15P40933 162 aaPredicted RBP24.19■■□□□ 1.46
SSR1-204ENST00000474597 CTSWP56202 376 aa24.19■■□□□ 1.46
SSR1-204ENST00000474597 CNTROBQ8N137 903 aa24.19■■□□□ 1.46
SSR1-204ENST00000474597 CCDC85AQ96PX6 553 aaPredicted RBP24.19■■□□□ 1.46
SSR1-204ENST00000474597 RTCBQ9Y3I0 505 aaKnown RBP24.19■■□□□ 1.46
SSR1-204ENST00000474597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.19■■□□□ 1.46
SSR1-204ENST00000474597 FAM177BA6PVY3 158 aa24.19■■□□□ 1.46
SSR1-204ENST00000474597 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
SSR1-204ENST00000474597 EYA2O00167 538 aa24.18■■□□□ 1.46
SSR1-204ENST00000474597 CIAO1O76071 339 aa24.18■■□□□ 1.46
SSR1-204ENST00000474597 TNNI3KQ59H18 835 aa24.18■■□□□ 1.46
SSR1-204ENST00000474597 ZNF594Q96JF6 807 aaPredicted RBP24.18■■□□□ 1.46
SSR1-204ENST00000474597 AK7Q96M32 723 aa24.18■■□□□ 1.46
SSR1-204ENST00000474597 FPGT-TNNI3KV9GXZ4 949 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms