RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-206ENST00000472815 CASP7P55210 303 aa18.02■□□□□ 0.48
HIF3A-206ENST00000472815 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.48
HIF3A-206ENST00000472815 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
HIF3A-206ENST00000472815 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-206ENST00000472815 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-206ENST00000472815 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
HIF3A-206ENST00000472815 RGL2O15211 777 aa18.01■□□□□ 0.47
HIF3A-206ENST00000472815 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-206ENST00000472815 ZBTB38Q8NAP3 1195 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-206ENST00000472815 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
HIF3A-206ENST00000472815 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
HIF3A-206ENST00000472815 OSBPL3Q9H4L5 887 aa18.01■□□□□ 0.47
HIF3A-206ENST00000472815 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
HIF3A-206ENST00000472815 PTF1AQ7RTS3 328 aa18■□□□□ 0.47
HIF3A-206ENST00000472815 BCL11AQ9H165 835 aa18■□□□□ 0.47
HIF3A-206ENST00000472815 TAF1LQ8IZX4 1826 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
HIF3A-206ENST00000472815 HLFQ16534 295 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
HIF3A-206ENST00000472815 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 AOX1Q06278 1338 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
HIF3A-206ENST00000472815 MX1P20591 662 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 COPRSQ9NQ92 184 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 PDE1AP54750 535 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
HIF3A-206ENST00000472815 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
HIF3A-206ENST00000472815 MYH3P11055 1940 aa17.97■□□□□ 0.47
HIF3A-206ENST00000472815 EPHA10Q5JZY3 1008 aa17.97■□□□□ 0.47
HIF3A-206ENST00000472815 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-206ENST00000472815 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
HIF3A-206ENST00000472815 JARID2Q92833 1246 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-206ENST00000472815 GPATCH3Q96I76 525 aa17.97■□□□□ 0.47
HIF3A-206ENST00000472815 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 GPTP24298 496 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 FOXO4P98177 505 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 CASC1Q6TDU7 716 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 AK7Q96M32 723 aa17.96■□□□□ 0.47
HIF3A-206ENST00000472815 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
HIF3A-206ENST00000472815 APBA3O96018 575 aa17.95■□□□□ 0.46
HIF3A-206ENST00000472815 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-206ENST00000472815 SLC27A3Q5K4L6 730 aa17.95■□□□□ 0.46
HIF3A-206ENST00000472815 IL1RAPL2Q9NP60 686 aa17.95■□□□□ 0.46
HIF3A-206ENST00000472815 STAP2Q9UGK3 403 aa17.95■□□□□ 0.46
HIF3A-206ENST00000472815 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
HIF3A-206ENST00000472815 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
HIF3A-206ENST00000472815 PLSCR1O15162 318 aa17.95■□□□□ 0.46
HIF3A-206ENST00000472815 SCN7AQ01118 1682 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 C4BP0C0L5 1744 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 CDC45O75419 566 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 IFIT2P09913 472 aaKnown RBP17.94■□□□□ 0.46
HIF3A-206ENST00000472815 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 OTUD7AQ8TE49 926 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-206ENST00000472815 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 SALL3Q9BXA9 1300 aa17.94■□□□□ 0.46
HIF3A-206ENST00000472815 ERC2O15083 957 aa17.93■□□□□ 0.46
HIF3A-206ENST00000472815 GNPATO15228 680 aa17.93■□□□□ 0.46
HIF3A-206ENST00000472815 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
HIF3A-206ENST00000472815 SIL1Q9H173 461 aa17.93■□□□□ 0.46
HIF3A-206ENST00000472815 FBXO3Q9UK99 471 aa17.93■□□□□ 0.46
HIF3A-206ENST00000472815 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
HIF3A-206ENST00000472815 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
HIF3A-206ENST00000472815 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
HIF3A-206ENST00000472815 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
HIF3A-206ENST00000472815 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
HIF3A-206ENST00000472815 PDE8AO60658 829 aa17.92■□□□□ 0.46
HIF3A-206ENST00000472815 ZPR1O75312 459 aa17.92■□□□□ 0.46
HIF3A-206ENST00000472815 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
HIF3A-206ENST00000472815 BAG6P46379 1132 aa17.92■□□□□ 0.46
HIF3A-206ENST00000472815 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
HIF3A-206ENST00000472815 ADRA2BP18089 450 aa17.91■□□□□ 0.46
HIF3A-206ENST00000472815 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
HIF3A-206ENST00000472815 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
HIF3A-206ENST00000472815 UBN2Q6ZU65 1347 aa17.91■□□□□ 0.46
HIF3A-206ENST00000472815 USP42Q9H9J4 1324 aaKnown RBP17.9■□□□□ 0.46
HIF3A-206ENST00000472815 CSF1RP07333 972 aa17.9■□□□□ 0.46
HIF3A-206ENST00000472815 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
HIF3A-206ENST00000472815 KCNQ4P56696 695 aa17.9■□□□□ 0.46
HIF3A-206ENST00000472815 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
HIF3A-206ENST00000472815 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
HIF3A-206ENST00000472815 CIAO1O76071 339 aa17.89■□□□□ 0.46
HIF3A-206ENST00000472815 SASH1O94885 1247 aa17.89■□□□□ 0.46
HIF3A-206ENST00000472815 CTSWP56202 376 aa17.89■□□□□ 0.46
HIF3A-206ENST00000472815 AACSQ86V21 672 aa17.89■□□□□ 0.46
HIF3A-206ENST00000472815 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.46
HIF3A-206ENST00000472815 LAMB2P55268 1798 aa17.89■□□□□ 0.45
HIF3A-206ENST00000472815 AK9Q5TCS8 1911 aa17.89■□□□□ 0.45
HIF3A-206ENST00000472815 TUBGCP6Q96RT7 1819 aa17.89■□□□□ 0.45
HIF3A-206ENST00000472815 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms