RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
SIK3-208ENST00000472648 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
SIK3-208ENST00000472648 POLKQ9UBT6 870 aa8.08□□□□□ -1.12
SIK3-208ENST00000472648 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
SIK3-208ENST00000472648 SNED1Q8TER0 1413 aa8.08□□□□□ -1.12
SIK3-208ENST00000472648 CUL9Q8IWT3 2517 aa8.07□□□□□ -1.12
SIK3-208ENST00000472648 LAMB2P55268 1798 aa8.07□□□□□ -1.12
SIK3-208ENST00000472648 FBXO46Q6PJ61 603 aaPredicted RBP8.07□□□□□ -1.12
SIK3-208ENST00000472648 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
SIK3-208ENST00000472648 ZC3H15Q8WU90 426 aaKnown RBP8.07□□□□□ -1.12
SIK3-208ENST00000472648 KIAA0100Q14667 2235 aaKnown RBP8.07□□□□□ -1.12
SIK3-208ENST00000472648 CEP290O15078 2479 aa8.07□□□□□ -1.12
SIK3-208ENST00000472648 IL6STP40189 918 aaPredicted RBP8.06□□□□□ -1.12
SIK3-208ENST00000472648 TNNT2P45379 298 aaPredicted RBP8.06□□□□□ -1.12
SIK3-208ENST00000472648 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
SIK3-208ENST00000472648 REM2Q8IYK8 340 aaPredicted RBP8.06□□□□□ -1.12
SIK3-208ENST00000472648 C2orf69Q8N8R5 385 aa8.06□□□□□ -1.12
SIK3-208ENST00000472648 GBA2Q9HCG7 927 aaPredicted RBP8.06□□□□□ -1.12
SIK3-208ENST00000472648 PGAP2Q9UHJ9 254 aa8.06□□□□□ -1.12
SIK3-208ENST00000472648 COLQQ9Y215 455 aaPredicted RBP8.06□□□□□ -1.12
SIK3-208ENST00000472648 CDHR2Q9BYE9 1310 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 LAMB4A4D0S4 1761 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 KLRG2A4D1S0 409 aaPredicted RBP8.05□□□□□ -1.12
SIK3-208ENST00000472648 CAMTA2O94983 1202 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 GMPSP49915 693 aaPredicted RBP8.05□□□□□ -1.12
SIK3-208ENST00000472648 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 USP48Q86UV5 1035 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 BCL2L13Q9BXK5 485 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 CARD14Q9BXL6 1004 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 LGR6Q9HBX8 967 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 ZNF652Q9Y2D9 606 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 NPC1L1Q9UHC9 1359 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 LAMB1P07942 1786 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 ANKRD36CQ5JPF3 1778 aa8.05□□□□□ -1.12
SIK3-208ENST00000472648 TAF1P21675 1872 aa8.04□□□□□ -1.12
SIK3-208ENST00000472648 PPIP5K2O43314 1243 aa8.04□□□□□ -1.12
SIK3-208ENST00000472648 SLC10A3P09131 477 aa8.04□□□□□ -1.12
SIK3-208ENST00000472648 CDCA8Q53HL2 280 aa8.04□□□□□ -1.12
SIK3-208ENST00000472648 DZIP3Q86Y13 1208 aaKnown RBP8.04□□□□□ -1.12
SIK3-208ENST00000472648 ZNF296Q8WUU4 475 aaPredicted RBP8.04□□□□□ -1.12
SIK3-208ENST00000472648 TEX13AQ9BXU3 409 aaPredicted RBP8.04□□□□□ -1.12
SIK3-208ENST00000472648 HEG1Q9ULI3 1381 aa8.04□□□□□ -1.12
SIK3-208ENST00000472648 UNC80Q8N2C7 3258 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 KDM3BQ7LBC6 1761 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
SIK3-208ENST00000472648 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
SIK3-208ENST00000472648 SULT6B1Q6IMI4 303 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 TRPM4Q8TD43 1214 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 PSME4Q14997 1843 aa8.03□□□□□ -1.12
SIK3-208ENST00000472648 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 H7C1D1 291 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 HIRAP54198 1017 aaPredicted RBP8.02□□□□□ -1.13
SIK3-208ENST00000472648 CXCL9Q07325 125 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 AOC3Q16853 763 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
SIK3-208ENST00000472648 CLEC4GQ6UXB4 293 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 KRT26Q7Z3Y9 468 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
SIK3-208ENST00000472648 TMX4Q9H1E5 349 aaPredicted RBP8.02□□□□□ -1.13
SIK3-208ENST00000472648 ZNRF3Q9ULT6 936 aa8.02□□□□□ -1.13
SIK3-208ENST00000472648 PPEF1O14829 653 aaPredicted RBP8.01□□□□□ -1.13
SIK3-208ENST00000472648 TBC1D8O95759 1140 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 A1BGP04217 495 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 MNX1P50219 401 aaPredicted RBP8.01□□□□□ -1.13
SIK3-208ENST00000472648 TNIP1Q15025 636 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 DLK2Q6UY11 383 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 RASAL3Q86YV0 1011 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 VPS33BQ9H267 617 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 CNOT7Q9UIV1 285 aaKnown RBP8.01□□□□□ -1.13
SIK3-208ENST00000472648 NIP7Q9Y221 180 aaKnown RBP eCLIP8.01□□□□□ -1.13
SIK3-208ENST00000472648 RIC1Q4ADV7 1423 aa8.01□□□□□ -1.13
SIK3-208ENST00000472648 ADM5C9JUS6 153 aa8□□□□□ -1.13
SIK3-208ENST00000472648 GPR25O00155 361 aa8□□□□□ -1.13
SIK3-208ENST00000472648 TCERG1O14776 1098 aaKnown RBP8□□□□□ -1.13
SIK3-208ENST00000472648 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
SIK3-208ENST00000472648 MICALL2Q8IY33 904 aa8□□□□□ -1.13
SIK3-208ENST00000472648 SUPT20HQ8NEM7 779 aa8□□□□□ -1.13
SIK3-208ENST00000472648 DCPSQ96C86 337 aaKnown RBP8□□□□□ -1.13
SIK3-208ENST00000472648 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
SIK3-208ENST00000472648 RANBP2P49792 3224 aaKnown RBP8□□□□□ -1.13
SIK3-208ENST00000472648 LRRC37AA6NMS7 1700 aa8□□□□□ -1.13
SIK3-208ENST00000472648 ABCC12Q96J65 1359 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 FKTNO75072 461 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 RAD17O75943 681 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 CRY2Q49AN0 593 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 NYXQ9GZU5 481 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 PITPNM2Q9BZ72 1349 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 SCN9AQ15858 1988 aa7.99□□□□□ -1.13
SIK3-208ENST00000472648 SHTN1A0MZ66 631 aa7.98□□□□□ -1.13
SIK3-208ENST00000472648 PIP4K2AP48426 406 aaPredicted RBP7.98□□□□□ -1.13
SIK3-208ENST00000472648 TEFQ10587 303 aa7.98□□□□□ -1.13
SIK3-208ENST00000472648 TBC1D10BQ4KMP7 808 aaPredicted RBP7.98□□□□□ -1.13
SIK3-208ENST00000472648 ZNF790Q6PG37 636 aa7.98□□□□□ -1.13
SIK3-208ENST00000472648 SAMD7Q7Z3H4 446 aa7.98□□□□□ -1.13
SIK3-208ENST00000472648 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms