RNA–Protein interactions for RNA: ENST00000472401.5

PDE9A-222, Transcript of phosphodiesterase 9A, human

TSL 3

Gene PDE9A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-222	ENST00000472401	RGMB	Q6NW40	437 aa		12.4	□□□□□ -0.42
PDE9A-222	ENST00000472401	PGAP2	Q9UHJ9	254 aa		12.4	□□□□□ -0.42
PDE9A-222	ENST00000472401	A1BG	P04217	495 aa		12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	GMPS	P49915	693 aa	Predicted RBP	12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	DZIP3	Q86Y13	1208 aa	Known RBP	12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	NIM1K	Q8IY84	436 aa		12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	TRPM4	Q8TD43	1214 aa		12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	ZNF496	Q96IT1	587 aa	Predicted RBP	12.39	□□□□□ -0.43
PDE9A-222	ENST00000472401	FAM177B	A6PVY3	158 aa		12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	DIEXF	Q68CQ4	756 aa	Known RBP	12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	CDC37L1	Q7L3B6	337 aa		12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	USP48	Q86UV5	1035 aa		12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	CSRNP1	Q96S65	589 aa		12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	NPC1L1	Q9UHC9	1359 aa		12.38	□□□□□ -0.43
PDE9A-222	ENST00000472401	ALDH1B1	P30837	517 aa		12.37	□□□□□ -0.43
PDE9A-222	ENST00000472401	PIP4K2A	P48426	406 aa	Predicted RBP	12.37	□□□□□ -0.43
PDE9A-222	ENST00000472401	TTC5	Q8N0Z6	440 aa		12.37	□□□□□ -0.43
PDE9A-222	ENST00000472401	HEG1	Q9ULI3	1381 aa		12.37	□□□□□ -0.43
PDE9A-222	ENST00000472401	CUL9	Q8IWT3	2517 aa		12.37	□□□□□ -0.43
PDE9A-222	ENST00000472401	SHTN1	A0MZ66	631 aa		12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	ZNF157	P51786	506 aa	Predicted RBP	12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	CXCL9	Q07325	125 aa		12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	PKN2	Q16513	984 aa	Known RBP	12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	ZC3H15	Q8WU90	426 aa	Known RBP	12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	CCDC102A	Q96A19	550 aa		12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	GBA2	Q9HCG7	927 aa	Predicted RBP	12.36	□□□□□ -0.43
PDE9A-222	ENST00000472401	ABCC12	Q96J65	1359 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	PPIP5K2	O43314	1243 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	SLC10A3	P09131	477 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	AOC3	Q16853	763 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	CDCA8	Q53HL2	280 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	CC2D2B	Q6DHV5	1058 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	NPM2	Q86SE8	214 aa	Known RBP	12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	HDAC9	Q9UKV0	1011 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401		A0A0C4DFX4	3053 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	TRIOBP	Q9H2D6	2365 aa		12.35	□□□□□ -0.43
PDE9A-222	ENST00000472401	TPTE2	Q6XPS3	522 aa		12.34	□□□□□ -0.43
PDE9A-222	ENST00000472401	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE9A-222	ENST00000472401	COLQ	Q9Y215	455 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE9A-222	ENST00000472401	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
PDE9A-222	ENST00000472401	SZT2	Q5T011	3432 aa		12.34	□□□□□ -0.43
PDE9A-222	ENST00000472401	AKAP11	Q9UKA4	1901 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	POTEF	A5A3E0	1075 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	TCERG1	O14776	1098 aa	Known RBP	12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	CRY2	Q49AN0	593 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	CLEC4G	Q6UXB4	293 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	C2orf69	Q8N8R5	385 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	SLC17A8	Q8NDX2	589 aa		12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.33	□□□□□ -0.44
PDE9A-222	ENST00000472401	HTT	P42858	3142 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	ADM5	C9JUS6	153 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	IL13	P35225	146 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	ZNF790	Q6PG37	636 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	ZNRF3	Q9ULT6	936 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	ZNF652	Q9Y2D9	606 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	CDHR2	Q9BYE9	1310 aa		12.32	□□□□□ -0.44
PDE9A-222	ENST00000472401	RAD17	O75943	681 aa		12.31	□□□□□ -0.44
PDE9A-222	ENST00000472401	TBC1D8	O95759	1140 aa		12.31	□□□□□ -0.44
PDE9A-222	ENST00000472401	MTHFSD	Q2M296	383 aa	Known RBP	12.31	□□□□□ -0.44
PDE9A-222	ENST00000472401	KRT26	Q7Z3Y9	468 aa		12.31	□□□□□ -0.44
PDE9A-222	ENST00000472401	BCL2L13	Q9BXK5	485 aa		12.31	□□□□□ -0.44
PDE9A-222	ENST00000472401	PPEF1	O14829	653 aa	Predicted RBP	12.3	□□□□□ -0.44
PDE9A-222	ENST00000472401	NUTM1	Q86Y26	1132 aa		12.3	□□□□□ -0.44
PDE9A-222	ENST00000472401	RASAL3	Q86YV0	1011 aa		12.3	□□□□□ -0.44
PDE9A-222	ENST00000472401	CNOT7	Q9UIV1	285 aa	Known RBP	12.3	□□□□□ -0.44
PDE9A-222	ENST00000472401	RIC1	Q4ADV7	1423 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	EGFR	P00533	1210 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	HMOX1	P09601	288 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	GTF2E1	P29083	439 aa	Predicted RBP	12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	HOXA10	P31260	410 aa	Predicted RBP	12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	GRIPAP1	Q4V328	841 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	MICALL2	Q8IY33	904 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	RPGR	Q92834	1020 aa	Known RBP	12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	FMNL2	Q96PY5	1086 aa		12.29	□□□□□ -0.44
PDE9A-222	ENST00000472401	KCNQ3	O43525	872 aa		12.28	□□□□□ -0.44
PDE9A-222	ENST00000472401	HLF	Q16534	295 aa		12.28	□□□□□ -0.44
PDE9A-222	ENST00000472401	SAMD7	Q7Z3H4	446 aa		12.28	□□□□□ -0.44
PDE9A-222	ENST00000472401	USP16	Q9Y5T5	823 aa		12.28	□□□□□ -0.44
PDE9A-222	ENST00000472401	CEP290	O15078	2479 aa		12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	PRAMEF22	A3QJZ6	481 aa		12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401		H7C1D1	291 aa		12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	GPR25	O00155	361 aa		12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	KIF7	Q2M1P5	1343 aa		12.27	□□□□□ -0.45
PDE9A-222	ENST00000472401	TEF	Q10587	303 aa		12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	TNIP1	Q15025	636 aa		12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	C3orf67	Q6ZVT6	689 aa		12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	REM2	Q8IYK8	340 aa	Predicted RBP	12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	IL17RE	Q8NFR9	667 aa		12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	CRAMP1	Q96RY5	1269 aa		12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	KIAA0100	Q14667	2235 aa	Known RBP	12.26	□□□□□ -0.45
PDE9A-222	ENST00000472401	YDJC	A8MPS7	323 aa		12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	NBPF26	B4DH59	902 aa		12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	EN2	P19622	333 aa	Predicted RBP	12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	NBPF10	Q6P3W6	841 aa	Known RBP	12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	VPS33B	Q9H267	617 aa		12.25	□□□□□ -0.45
PDE9A-222	ENST00000472401	R3HDML	Q9H3Y0	253 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms