RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 SASH1O94885 1247 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 KLHDC4Q8TBB5 520 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 HSP90AB3PQ58FF7 597 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
GCFC2-208ENST00000472230 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
GCFC2-208ENST00000472230 GLRX3O76003 335 aaKnown RBP22.39■■□□□ 1.17
GCFC2-208ENST00000472230 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.17
GCFC2-208ENST00000472230 GIGYF2Q6Y7W6 1299 aaKnown RBP22.39■■□□□ 1.17
GCFC2-208ENST00000472230 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
GCFC2-208ENST00000472230 FOXO4P98177 505 aa22.38■■□□□ 1.17
GCFC2-208ENST00000472230 TRIM28Q13263 835 aaKnown RBP22.38■■□□□ 1.17
GCFC2-208ENST00000472230 CNTROBQ8N137 903 aa22.38■■□□□ 1.17
GCFC2-208ENST00000472230 TBC1D2Q9BYX2 928 aa22.38■■□□□ 1.17
GCFC2-208ENST00000472230 ECHDC1Q9NTX5 307 aa22.38■■□□□ 1.17
GCFC2-208ENST00000472230 LOC102724428A0A0B4J2F2 783 aa22.37■■□□□ 1.17
GCFC2-208ENST00000472230 SIK1P57059 783 aa22.37■■□□□ 1.17
GCFC2-208ENST00000472230 PTPN12Q05209 780 aaKnown RBP22.37■■□□□ 1.17
GCFC2-208ENST00000472230 ANKRD36CQ5JPF3 1778 aa22.37■■□□□ 1.17
GCFC2-208ENST00000472230 PALLDQ8WX93 1383 aa22.37■■□□□ 1.17
GCFC2-208ENST00000472230 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
GCFC2-208ENST00000472230 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
GCFC2-208ENST00000472230 USP26Q9BXU7 913 aa22.36■■□□□ 1.17
GCFC2-208ENST00000472230 CHMLP26374 656 aa22.36■■□□□ 1.17
GCFC2-208ENST00000472230 DZIP3Q86Y13 1208 aaKnown RBP22.36■■□□□ 1.17
GCFC2-208ENST00000472230 CCDC87Q9NVE4 849 aa22.36■■□□□ 1.17
GCFC2-208ENST00000472230 ESYT1Q9BSJ8 1104 aa22.35■■□□□ 1.17
GCFC2-208ENST00000472230 PCCAP05165 728 aaPredicted RBP22.34■■□□□ 1.17
GCFC2-208ENST00000472230 HSPA1LP34931 641 aa22.34■■□□□ 1.17
GCFC2-208ENST00000472230 EAF2Q96CJ1 260 aaPredicted RBP22.34■■□□□ 1.17
GCFC2-208ENST00000472230 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
GCFC2-208ENST00000472230 KCNQ2O43526 872 aa22.34■■□□□ 1.17
GCFC2-208ENST00000472230 HLFQ16534 295 aa22.34■■□□□ 1.17
GCFC2-208ENST00000472230 CICQ96RK0 1608 aaPredicted RBP22.34■■□□□ 1.17
GCFC2-208ENST00000472230 ERVV-1B6SEH8 477 aa22.33■■□□□ 1.17
GCFC2-208ENST00000472230 NUP98P52948 1817 aa22.33■■□□□ 1.17
GCFC2-208ENST00000472230 CRKLP46109 303 aaKnown RBP22.33■■□□□ 1.16
GCFC2-208ENST00000472230 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.16
GCFC2-208ENST00000472230 GPTP24298 496 aa22.32■■□□□ 1.16
GCFC2-208ENST00000472230 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
GCFC2-208ENST00000472230 TFCP2Q12800 502 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
GCFC2-208ENST00000472230 KIF2CQ99661 725 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 ITPK1Q13572 414 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 SNX21Q969T3 373 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 FAM89AQ96GI7 184 aa22.31■■□□□ 1.16
GCFC2-208ENST00000472230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.31■■□□□ 1.16
GCFC2-208ENST00000472230 RREB1Q92766 1687 aa22.3■■□□□ 1.16
GCFC2-208ENST00000472230 EIF5P55010 431 aaKnown RBP22.3■■□□□ 1.16
GCFC2-208ENST00000472230 TNNI3KQ59H18 835 aa22.29■■□□□ 1.16
GCFC2-208ENST00000472230 FPGT-TNNI3KV9GXZ4 949 aa22.29■■□□□ 1.16
GCFC2-208ENST00000472230 MCCP23508 829 aa22.29■■□□□ 1.16
GCFC2-208ENST00000472230 CCDC57Q2TAC2 916 aa22.29■■□□□ 1.16
GCFC2-208ENST00000472230 AFF2P51816 1311 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 CDHR2Q9BYE9 1310 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 NBR1Q14596 966 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 TLR7Q9NYK1 1049 aaKnown RBP22.28■■□□□ 1.16
GCFC2-208ENST00000472230 RABEP1Q15276 862 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 EVI5LQ96CN4 794 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 ANO2Q9NQ90 1003 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
GCFC2-208ENST00000472230 IL15P40933 162 aaPredicted RBP22.27■■□□□ 1.16
GCFC2-208ENST00000472230 GJD4Q96KN9 370 aaPredicted RBP22.27■■□□□ 1.16
GCFC2-208ENST00000472230 DIAPH3Q9NSV4 1193 aa22.27■■□□□ 1.16
GCFC2-208ENST00000472230 TRMT112Q9UI30 125 aaKnown RBP22.27■■□□□ 1.16
GCFC2-208ENST00000472230 COL5A3P25940 1745 aaPredicted RBP22.27■■□□□ 1.15
GCFC2-208ENST00000472230 TAF7LQ5H9L4 462 aa22.26■■□□□ 1.15
GCFC2-208ENST00000472230 SLKQ9H2G2 1235 aaPredicted RBP22.26■■□□□ 1.15
GCFC2-208ENST00000472230 EYA2O00167 538 aa22.26■■□□□ 1.15
GCFC2-208ENST00000472230 RUFY2Q8WXA3 655 aa22.25■■□□□ 1.15
GCFC2-208ENST00000472230 ZNF594Q96JF6 807 aaPredicted RBP22.25■■□□□ 1.15
GCFC2-208ENST00000472230 CIAO1O76071 339 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 ATG9AQ7Z3C6 839 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 ZNF34Q8IZ26 560 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 MYH14Q7Z406 1995 aaKnown RBP22.24■■□□□ 1.15
GCFC2-208ENST00000472230 NHSQ6T4R5 1651 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 MYH3P11055 1940 aa22.24■■□□□ 1.15
GCFC2-208ENST00000472230 IRS4O14654 1257 aaPredicted RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 IFIT5Q13325 482 aaKnown RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 GPR108Q9NPR9 543 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 DBNLQ9UJU6 430 aaKnown RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 TRPC5Q9UL62 973 aaPredicted RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 BTAF1O14981 1849 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 HIP1O00291 1037 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 EPB41L2O43491 1005 aaKnown RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 CSF1RP07333 972 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
GCFC2-208ENST00000472230 FBXO3Q9UK99 471 aa22.23■■□□□ 1.15
GCFC2-208ENST00000472230 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
GCFC2-208ENST00000472230 CWC27Q6UX04 472 aaKnown RBP22.22■■□□□ 1.15
GCFC2-208ENST00000472230 SGSM2O43147 1006 aa22.22■■□□□ 1.15
GCFC2-208ENST00000472230 ATP5JP18859 108 aa22.22■■□□□ 1.15
GCFC2-208ENST00000472230 KIAA1211Q6ZU35 1233 aa22.22■■□□□ 1.15
GCFC2-208ENST00000472230 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms