RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
GREB1-209ENST00000472040 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
GREB1-209ENST00000472040 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
GREB1-209ENST00000472040 NIP7Q9Y221 180 aaKnown RBP eCLIP18.46■□□□□ 0.55
GREB1-209ENST00000472040 PCCAP05165 728 aaPredicted RBP18.45■□□□□ 0.54
GREB1-209ENST00000472040 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
GREB1-209ENST00000472040 ZBTB38Q8NAP3 1195 aaPredicted RBP18.45■□□□□ 0.54
GREB1-209ENST00000472040 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
GREB1-209ENST00000472040 FKBP8Q14318 412 aa18.44■□□□□ 0.54
GREB1-209ENST00000472040 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
GREB1-209ENST00000472040 CDHR2Q9BYE9 1310 aa18.44■□□□□ 0.54
GREB1-209ENST00000472040 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
GREB1-209ENST00000472040 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
GREB1-209ENST00000472040 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
GREB1-209ENST00000472040 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 MSH5O43196 834 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 GNAI2P04899 355 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
GREB1-209ENST00000472040 GPTP24298 496 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 CASP7P55210 303 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 NFIXQ14938 502 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 MEIS3Q99687 375 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 PLA2G12BQ9BX93 195 aa18.42■□□□□ 0.54
GREB1-209ENST00000472040 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
GREB1-209ENST00000472040 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
GREB1-209ENST00000472040 TRMT112Q9UI30 125 aaKnown RBP18.41■□□□□ 0.54
GREB1-209ENST00000472040 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
GREB1-209ENST00000472040 SH3TC1Q8TE82 1336 aa18.41■□□□□ 0.54
GREB1-209ENST00000472040 NTSR2O95665 410 aa18.4■□□□□ 0.54
GREB1-209ENST00000472040 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
GREB1-209ENST00000472040 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
GREB1-209ENST00000472040 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
GREB1-209ENST00000472040 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
GREB1-209ENST00000472040 POLRMTO00411 1230 aaKnown RBP18.37■□□□□ 0.53
GREB1-209ENST00000472040 SOCS7O14512 581 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 SERPINB2P05120 415 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 MTX1Q13505 466 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 UBE3BQ7Z3V4 1068 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
GREB1-209ENST00000472040 IRS4O14654 1257 aaPredicted RBP18.36■□□□□ 0.53
GREB1-209ENST00000472040 PDE8AO60658 829 aa18.36■□□□□ 0.53
GREB1-209ENST00000472040 R3HDM1Q15032 1099 aaKnown RBP18.36■□□□□ 0.53
GREB1-209ENST00000472040 RABL6Q3YEC7 729 aaPredicted RBP18.36■□□□□ 0.53
GREB1-209ENST00000472040 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
GREB1-209ENST00000472040 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
GREB1-209ENST00000472040 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
GREB1-209ENST00000472040 ATP8B2P98198 1209 aa18.35■□□□□ 0.53
GREB1-209ENST00000472040 KAZALD1Q96I82 304 aa18.35■□□□□ 0.53
GREB1-209ENST00000472040 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
GREB1-209ENST00000472040 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
GREB1-209ENST00000472040 CSF1RP07333 972 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 DDR1Q08345 913 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 NRXN2Q9P2S2 1712 aa18.34■□□□□ 0.53
GREB1-209ENST00000472040 HMMRO75330 724 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 MMP10P09238 476 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 ST5P78524 1137 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 FOXO4P98177 505 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 SF3B3Q15393 1217 aaKnown RBP18.33■□□□□ 0.52
GREB1-209ENST00000472040 CEP85Q6P2H3 762 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
GREB1-209ENST00000472040 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
GREB1-209ENST00000472040 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
GREB1-209ENST00000472040 PRR5LQ6MZQ0 368 aa18.32■□□□□ 0.52
GREB1-209ENST00000472040 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
GREB1-209ENST00000472040 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
GREB1-209ENST00000472040 PCDHB15Q9Y5E8 787 aa18.32■□□□□ 0.52
GREB1-209ENST00000472040 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
GREB1-209ENST00000472040 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
GREB1-209ENST00000472040 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
GREB1-209ENST00000472040 RWDD1Q9H446 243 aaPredicted RBP18.31■□□□□ 0.52
GREB1-209ENST00000472040 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
GREB1-209ENST00000472040 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 NPHP1O15259 732 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 POLD1P28340 1107 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 CTSWP56202 376 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 NUTM1Q86Y26 1132 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 LAMB2P55268 1798 aa18.3■□□□□ 0.52
GREB1-209ENST00000472040 POLA2Q14181 598 aa18.29■□□□□ 0.52
GREB1-209ENST00000472040 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
GREB1-209ENST00000472040 EPHA10Q5JZY3 1008 aa18.29■□□□□ 0.52
GREB1-209ENST00000472040 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
GREB1-209ENST00000472040 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
GREB1-209ENST00000472040 C1orf115Q9H7X2 142 aa18.29■□□□□ 0.52
GREB1-209ENST00000472040 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
GREB1-209ENST00000472040 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
GREB1-209ENST00000472040 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
GREB1-209ENST00000472040 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
GREB1-209ENST00000472040 SRGAP3O43295 1099 aa18.27■□□□□ 0.52
GREB1-209ENST00000472040 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
GREB1-209ENST00000472040 PDE6BP35913 854 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms