RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-221ENST00000471887 PRR12Q9ULL5 1215 aa9.67□□□□□ -0.86
HDAC9-221ENST00000471887 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
HDAC9-221ENST00000471887 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
HDAC9-221ENST00000471887 OPLAHO14841 1288 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 SERPINB4P48594 390 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 MTMR3Q13615 1198 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 FAM26DQ5JW98 314 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-221ENST00000471887 AVENQ9NQS1 362 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-221ENST00000471887 EGFL7Q9UHF1 273 aa9.65□□□□□ -0.86
HDAC9-221ENST00000471887 ARAFP10398 606 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 ZAP70P43403 619 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 FKBP4Q02790 459 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC9-221ENST00000471887 ZNF211Q13398 564 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-221ENST00000471887 GRIN2CQ14957 1233 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 ZNF468Q5VIY5 522 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-221ENST00000471887 RGL4Q8IZJ4 473 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 ZSCAN1Q8NBB4 408 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
HDAC9-221ENST00000471887 GDF2Q9UK05 429 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-221ENST00000471887 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
HDAC9-221ENST00000471887 ZBTB39O15060 712 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 FAM13AO94988 1023 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 MPSTP25325 297 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
HDAC9-221ENST00000471887 GOLGA6L1Q8N7Z2 621 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 ACDQ96AP0 544 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 SLC30A3Q99726 388 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 ANO2Q9NQ90 1003 aa9.63□□□□□ -0.87
HDAC9-221ENST00000471887 NPR3P17342 541 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 ADH6P28332 368 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
HDAC9-221ENST00000471887 KCNA1Q09470 495 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 ALKBH2Q6NS38 261 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
HDAC9-221ENST00000471887 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
HDAC9-221ENST00000471887 H3BRB1 525 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 ICMTO60725 284 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 CCINQ13939 588 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 GLYCTKQ8IVS8 523 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 PNMA5Q96PV4 448 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 GSX2Q9BZM3 304 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 TUT1Q9H6E5 874 aaKnown RBP9.61□□□□□ -0.87
HDAC9-221ENST00000471887 GGA1Q9UJY5 639 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 GNEQ9Y223 722 aaKnown RBP9.61□□□□□ -0.87
HDAC9-221ENST00000471887 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
HDAC9-221ENST00000471887 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 CELA2BP08218 269 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 EIF1AXP47813 144 aaKnown RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 PCBP4P57723 403 aaKnown RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 LYPD4Q6UWN0 246 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 RAB44Q7Z6P3 723 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-221ENST00000471887 SYT9Q86SS6 491 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 GPR152Q8TDT2 470 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 BHMTQ93088 406 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 LRRC4BQ9NT99 713 aa9.6□□□□□ -0.87
HDAC9-221ENST00000471887 NEURL1BA8MQ27 555 aa9.59□□□□□ -0.87
HDAC9-221ENST00000471887 BCRP11274 1271 aa9.59□□□□□ -0.87
HDAC9-221ENST00000471887 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-221ENST00000471887 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
HDAC9-221ENST00000471887 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
HDAC9-221ENST00000471887 WHAMMQ8TF30 809 aa9.59□□□□□ -0.87
HDAC9-221ENST00000471887 SIN3BO75182 1162 aa9.58□□□□□ -0.88
HDAC9-221ENST00000471887 XYLBO75191 536 aa9.58□□□□□ -0.88
HDAC9-221ENST00000471887 EGFRP00533 1210 aa9.58□□□□□ -0.88
HDAC9-221ENST00000471887 AAMPQ13685 434 aa9.58□□□□□ -0.88
HDAC9-221ENST00000471887 FNDC3AQ9Y2H6 1198 aaKnown RBP9.58□□□□□ -0.88
HDAC9-221ENST00000471887 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-221ENST00000471887 KCNMB2Q9Y691 235 aa9.58□□□□□ -0.88
HDAC9-221ENST00000471887 OIP5O43482 229 aa9.57□□□□□ -0.88
HDAC9-221ENST00000471887 PCSK2P16519 638 aa9.57□□□□□ -0.88
HDAC9-221ENST00000471887 ENAMQ9NRM1 1142 aa9.57□□□□□ -0.88
HDAC9-221ENST00000471887 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
HDAC9-221ENST00000471887 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
HDAC9-221ENST00000471887 NFKB1P19838 968 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-221ENST00000471887 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
HDAC9-221ENST00000471887 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 GALNT6Q8NCL4 622 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 EDARADDQ8WWZ3 215 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 EDEM1Q92611 657 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 NUDT16Q96DE0 195 aaKnown RBP9.56□□□□□ -0.88
HDAC9-221ENST00000471887 IVNS1ABPQ9Y6Y0 642 aa9.56□□□□□ -0.88
HDAC9-221ENST00000471887 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 UBAP1LF5GYI3 381 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 SASH3O75995 380 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 RARAP10276 462 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 EPXP11678 715 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 TRIP4Q15650 581 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-221ENST00000471887 AEBP1Q8IUX7 1158 aa9.55□□□□□ -0.88
HDAC9-221ENST00000471887 HOMEZQ8IX15 550 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms