RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 EPB42P16452 691 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 AMPD1P23109 780 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 PCBP4P57723 403 aaKnown RBP11.24□□□□□ -0.61
CCDC39-202ENST00000471307 C11orf91Q3C1V1 193 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 MKL2Q9ULH7 1088 aa11.24□□□□□ -0.61
CCDC39-202ENST00000471307 PIK3R2O00459 728 aa11.23□□□□□ -0.61
CCDC39-202ENST00000471307 DGKZQ13574 1117 aa11.23□□□□□ -0.61
CCDC39-202ENST00000471307 BTBD6Q96KE9 485 aa11.23□□□□□ -0.61
CCDC39-202ENST00000471307 SLC30A3Q99726 388 aa11.23□□□□□ -0.61
CCDC39-202ENST00000471307 C11orf16Q9NQ32 467 aa11.23□□□□□ -0.61
CCDC39-202ENST00000471307 CXXC1Q9P0U4 656 aaPredicted RBP11.23□□□□□ -0.61
CCDC39-202ENST00000471307 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
CCDC39-202ENST00000471307 IRS1P35568 1242 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 TMEM151AQ8N4L1 468 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 CNTNAP5Q8WYK1 1306 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 TNFRSF25Q93038 417 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 MDFIQ99750 246 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
CCDC39-202ENST00000471307 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
CCDC39-202ENST00000471307 ELOA3DA6NLF2 546 aaPredicted RBP11.21□□□□□ -0.61
CCDC39-202ENST00000471307 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.61
CCDC39-202ENST00000471307 GDF11O95390 407 aa11.21□□□□□ -0.61
CCDC39-202ENST00000471307 ELOA3BQ3SY89 546 aa11.21□□□□□ -0.61
CCDC39-202ENST00000471307 ELOA3Q8NG57 546 aa11.21□□□□□ -0.61
CCDC39-202ENST00000471307 ALAS2P22557 587 aa11.2□□□□□ -0.62
CCDC39-202ENST00000471307 CHSY3Q70JA7 882 aa11.2□□□□□ -0.62
CCDC39-202ENST00000471307 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
CCDC39-202ENST00000471307 HOXB4P17483 251 aaPredicted RBP11.19□□□□□ -0.62
CCDC39-202ENST00000471307 INPP5BP32019 993 aa11.19□□□□□ -0.62
CCDC39-202ENST00000471307 DGKGP49619 791 aa11.19□□□□□ -0.62
CCDC39-202ENST00000471307 IDH3AP50213 366 aa11.19□□□□□ -0.62
CCDC39-202ENST00000471307 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
CCDC39-202ENST00000471307 GRIN2CQ14957 1233 aa11.19□□□□□ -0.62
CCDC39-202ENST00000471307 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
CCDC39-202ENST00000471307 ARSDP51689 593 aa11.18□□□□□ -0.62
CCDC39-202ENST00000471307 COX20Q5RI15 118 aa11.18□□□□□ -0.62
CCDC39-202ENST00000471307 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
CCDC39-202ENST00000471307 ALYREFQ86V81 257 aaKnown RBP11.18□□□□□ -0.62
CCDC39-202ENST00000471307 MICAL2O94851 1124 aa11.17□□□□□ -0.62
CCDC39-202ENST00000471307 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
CCDC39-202ENST00000471307 GNB5O14775 395 aa11.16□□□□□ -0.62
CCDC39-202ENST00000471307 CCINQ13939 588 aa11.16□□□□□ -0.62
CCDC39-202ENST00000471307 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
CCDC39-202ENST00000471307 GSX2Q9BZM3 304 aa11.16□□□□□ -0.62
CCDC39-202ENST00000471307 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
CCDC39-202ENST00000471307 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
CCDC39-202ENST00000471307 BHMTQ93088 406 aa11.14□□□□□ -0.63
CCDC39-202ENST00000471307 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
CCDC39-202ENST00000471307 ADH7P40394 386 aa11.13□□□□□ -0.63
CCDC39-202ENST00000471307 RAB44Q7Z6P3 723 aaPredicted RBP11.13□□□□□ -0.63
CCDC39-202ENST00000471307 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
CCDC39-202ENST00000471307 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
CCDC39-202ENST00000471307 MKNK1Q9BUB5 465 aa11.12□□□□□ -0.63
CCDC39-202ENST00000471307 NOP53Q9NZM5 478 aaKnown RBP11.12□□□□□ -0.63
CCDC39-202ENST00000471307 SLAIN2Q9P270 581 aa11.12□□□□□ -0.63
CCDC39-202ENST00000471307 TMEM88BA6NKF7 163 aa11.11□□□□□ -0.63
CCDC39-202ENST00000471307 GRNP28799 593 aaKnown RBP11.11□□□□□ -0.63
CCDC39-202ENST00000471307 SAP130Q9H0E3 1048 aa11.11□□□□□ -0.63
CCDC39-202ENST00000471307 PRDM6Q9NQX0 595 aa11.11□□□□□ -0.63
CCDC39-202ENST00000471307 MAP3K6O95382 1288 aa11.1□□□□□ -0.63
CCDC39-202ENST00000471307 EGFRP00533 1210 aa11.1□□□□□ -0.63
CCDC39-202ENST00000471307 PCSK7Q16549 785 aa11.1□□□□□ -0.63
CCDC39-202ENST00000471307 DCAF5Q96JK2 942 aa11.1□□□□□ -0.63
CCDC39-202ENST00000471307 OPLAHO14841 1288 aa11.09□□□□□ -0.63
CCDC39-202ENST00000471307 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
CCDC39-202ENST00000471307 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
CCDC39-202ENST00000471307 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
CCDC39-202ENST00000471307 ETFBKMTQ8IXQ9 262 aa11.08□□□□□ -0.64
CCDC39-202ENST00000471307 TNFRSF10BO14763 440 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 IGHA1P01876 353 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 NFKB1P19838 968 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 NAA30Q147X3 362 aaPredicted RBP11.07□□□□□ -0.64
CCDC39-202ENST00000471307 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 ABTB2Q8N961 1025 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 STIM2Q9P246 746 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
CCDC39-202ENST00000471307 SPDYE3A6NKU9 549 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 M0R082 166 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 COL8A1P27658 744 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 SSFA2P28290 1259 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
CCDC39-202ENST00000471307 RGL4Q8IZJ4 473 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 ZNF417Q8TAU3 575 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 ZNF587Q96SQ5 575 aaPredicted RBP11.05□□□□□ -0.64
CCDC39-202ENST00000471307 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
CCDC39-202ENST00000471307 XYLBO75191 536 aa11.04□□□□□ -0.64
CCDC39-202ENST00000471307 C20orf204Q6ZNR8 217 aa11.04□□□□□ -0.64
CCDC39-202ENST00000471307 DNAJB12Q9NXW2 375 aaKnown RBP11.04□□□□□ -0.64
CCDC39-202ENST00000471307 ALBP02768 609 aa11.03□□□□□ -0.64
CCDC39-202ENST00000471307 RARAP10276 462 aa11.03□□□□□ -0.64
CCDC39-202ENST00000471307 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
CCDC39-202ENST00000471307 PIK3R5Q8WYR1 880 aa11.03□□□□□ -0.64
CCDC39-202ENST00000471307 SUV39H2Q9H5I1 410 aa11.03□□□□□ -0.64
CCDC39-202ENST00000471307 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms