RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
SMARCD3-206ENST00000470588 TJP1Q07157 1748 aa20.65■□□□□ 0.9
SMARCD3-206ENST00000470588 H7C1W4 665 aa20.64■□□□□ 0.9
SMARCD3-206ENST00000470588 SASH1O94885 1247 aa20.64■□□□□ 0.9
SMARCD3-206ENST00000470588 RABL6Q3YEC7 729 aaPredicted RBP20.64■□□□□ 0.9
SMARCD3-206ENST00000470588 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.9
SMARCD3-206ENST00000470588 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.9
SMARCD3-206ENST00000470588 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 MCCP23508 829 aa20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 CASP7P55210 303 aa20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 TTLL7Q6ZT98 887 aa20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 COPRSQ9NQ92 184 aa20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 CIZ1Q9ULV3 898 aaPredicted RBP20.64■□□□□ 0.89
SMARCD3-206ENST00000470588 DDIT3P35638 169 aa20.63■□□□□ 0.89
SMARCD3-206ENST00000470588 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 CWC25Q9NXE8 425 aaPredicted RBP20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 KIF6Q6ZMV9 814 aa20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 AACSQ86V21 672 aa20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 CCDC191Q8NCU4 936 aa20.62■□□□□ 0.89
SMARCD3-206ENST00000470588 DEKP35659 375 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-206ENST00000470588 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-206ENST00000470588 ANAPC15P60006 121 aa20.61■□□□□ 0.89
SMARCD3-206ENST00000470588 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
SMARCD3-206ENST00000470588 ST18O60284 1047 aa20.6■□□□□ 0.89
SMARCD3-206ENST00000470588 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
SMARCD3-206ENST00000470588 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
SMARCD3-206ENST00000470588 MAP4K4O95819 1239 aaPredicted RBP20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 JARID2Q92833 1246 aaPredicted RBP20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 NHSQ6T4R5 1651 aa20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 EAF2Q96CJ1 260 aaPredicted RBP20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 ANO2Q9NQ90 1003 aa20.59■□□□□ 0.89
SMARCD3-206ENST00000470588 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.89
SMARCD3-206ENST00000470588 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-206ENST00000470588 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-206ENST00000470588 SGSM2O43147 1006 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 ATP6V1AP38606 617 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 FOXO4P98177 505 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 RUFY2Q8WXA3 655 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 EVI5LQ96CN4 794 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 SLC4A9Q96Q91 983 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 SIL1Q9H173 461 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 SIK1P57059 783 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 TRIM28Q13263 835 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 ZBTB3Q9H5J0 574 aa20.57■□□□□ 0.88
SMARCD3-206ENST00000470588 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-206ENST00000470588 TCIRG1Q13488 830 aa20.56■□□□□ 0.88
SMARCD3-206ENST00000470588 LMBR1LQ6UX01 489 aa20.56■□□□□ 0.88
SMARCD3-206ENST00000470588 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-206ENST00000470588 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
SMARCD3-206ENST00000470588 KCNQ2O43526 872 aa20.55■□□□□ 0.88
SMARCD3-206ENST00000470588 KLHDC4Q8TBB5 520 aa20.55■□□□□ 0.88
SMARCD3-206ENST00000470588 IL6STP40189 918 aaPredicted RBP20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 MCM2P49736 904 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 SEPT12Q8IYM1 358 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 ARXQ96QS3 562 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 BTAF1O14981 1849 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 HIP1O00291 1037 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.54■□□□□ 0.88
SMARCD3-206ENST00000470588 RREB1Q92766 1687 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 DIAPH3Q9NSV4 1193 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
SMARCD3-206ENST00000470588 HSPA4P34932 840 aa20.52■□□□□ 0.88
SMARCD3-206ENST00000470588 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 MCM4P33991 863 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 TFCP2Q12800 502 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 NEK4P51957 841 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 TNNI3KQ59H18 835 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 LSG1Q9H089 658 aaKnown RBP20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 IL25Q9H293 177 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 FPGT-TNNI3KV9GXZ4 949 aa20.51■□□□□ 0.87
SMARCD3-206ENST00000470588 ATP5JP18859 108 aa20.5■□□□□ 0.87
SMARCD3-206ENST00000470588 CRKLP46109 303 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-206ENST00000470588 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
SMARCD3-206ENST00000470588 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-206ENST00000470588 RAD50Q92878 1312 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 GSE1Q14687 1217 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 PALD1Q9ULE6 856 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 PCCAP05165 728 aaPredicted RBP20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 GIGYF2Q6Y7W6 1299 aaKnown RBP20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 DZIP3Q86Y13 1208 aaKnown RBP20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
SMARCD3-206ENST00000470588 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms