RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ISY1Q9ULR0 285 aaKnown RBP6.17□□□□□ -1.42
COL3A1-205ENST00000470167 SUFUQ9UMX1 484 aa6.17□□□□□ -1.42
COL3A1-205ENST00000470167 ZNF232Q9UNY5 417 aa6.17□□□□□ -1.42
COL3A1-205ENST00000470167 USTQ9Y2C2 406 aa6.17□□□□□ -1.42
COL3A1-205ENST00000470167 FCF1Q9Y324 198 aaKnown RBP6.17□□□□□ -1.42
COL3A1-205ENST00000470167 CTDP1Q9Y5B0 961 aaPredicted RBP6.17□□□□□ -1.42
COL3A1-205ENST00000470167 MAGEB6P1A0A0J9YX57 407 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 ATG7O95352 703 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 RBM5P52756 815 aaKnown RBP eCLIP6.16□□□□□ -1.42
COL3A1-205ENST00000470167 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
COL3A1-205ENST00000470167 PCGF5Q86SE9 256 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 ZBTB33Q86T24 672 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 FAM184AQ8NB25 1140 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 NFATC2IPQ8NCF5 419 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 C8orf37Q96NL8 207 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 NOL10Q9BSC4 688 aaKnown RBP6.16□□□□□ -1.42
COL3A1-205ENST00000470167 CXorf56Q9H5V9 222 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 FAN1Q9Y2M0 1017 aa6.16□□□□□ -1.42
COL3A1-205ENST00000470167 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 H0YHG0 523 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 KIF5CO60282 957 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 INHBEP58166 350 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 PSMD2Q13200 908 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 MAP9Q49MG5 647 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 KANK4Q5T7N3 995 aaPredicted RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 JAKMIP3Q5VZ66 844 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 CCDC73Q6ZRK6 1079 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 OTUD6AQ7L8S5 288 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 RNF135Q8IUD6 432 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 TTC30BQ8N4P2 665 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 C1orf131Q8NDD1 294 aaKnown RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 SMCR8Q8TEV9 937 aaPredicted RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 BAP1Q92560 729 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 UBXN4Q92575 508 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 FOXJ1Q92949 421 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 GPATCH3Q96I76 525 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 SEZ6LQ9BYH1 1024 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 VRTNQ9H8Y1 702 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 QTRT2Q9H974 415 aaKnown RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 KIAA1522Q9P206 1035 aaPredicted RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 WWC3Q9ULE0 1092 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 ODF2LQ9ULJ1 636 aa6.15□□□□□ -1.42
COL3A1-205ENST00000470167 THRAP3Q9Y2W1 955 aaKnown RBP6.15□□□□□ -1.42
COL3A1-205ENST00000470167 EEA1Q15075 1411 aa6.15□□□□□ -1.43
COL3A1-205ENST00000470167 TPPPO94811 219 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 HSPA5P11021 654 aaKnown RBP6.14□□□□□ -1.43
COL3A1-205ENST00000470167 KCNA2P16389 499 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 ALDH1B1P30837 517 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 BMS1Q14692 1282 aaKnown RBP6.14□□□□□ -1.43
COL3A1-205ENST00000470167 DNAJC21Q5F1R6 531 aaKnown RBP6.14□□□□□ -1.43
COL3A1-205ENST00000470167 MFSD4BQ5TF39 518 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 PLEKHM2Q8IWE5 1019 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 MICALL1Q8N3F8 863 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 MIGA1Q8NAN2 632 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 VTI1AQ96AJ9 217 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 INO80BQ9C086 356 aaPredicted RBP6.14□□□□□ -1.43
COL3A1-205ENST00000470167 IFT122Q9HBG6 1241 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 ZMIZ1Q9ULJ6 1067 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 NCAPD3P42695 1498 aa6.14□□□□□ -1.43
COL3A1-205ENST00000470167 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 PPEF1O14829 653 aaPredicted RBP6.13□□□□□ -1.43
COL3A1-205ENST00000470167 NBPF7P0C2Y1 421 aaPredicted RBP6.13□□□□□ -1.43
COL3A1-205ENST00000470167 IRX1P78414 480 aaPredicted RBP6.13□□□□□ -1.43
COL3A1-205ENST00000470167 NCOA4Q13772 614 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 AGERQ15109 404 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 C16orf87Q6PH81 154 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC91Q7Z6B0 441 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 SH3RF1Q7Z6J0 888 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 MORC1Q86VD1 984 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 ZSCAN30Q86W11 494 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 PHTF2Q8N3S3 785 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 ZNF511Q8NB15 262 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 PLPP7Q8NBV4 271 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
COL3A1-205ENST00000470167 STK32AQ8WU08 396 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 C17orf50Q8WW18 174 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 MAP3K20Q9NYL2 800 aaKnown RBP6.13□□□□□ -1.43
COL3A1-205ENST00000470167 SMARCA2P51531 1590 aa6.13□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L12C9JPN9 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L21D6R901 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 HTATSF1O43719 755 aaKnown RBP6.12□□□□□ -1.43
COL3A1-205ENST00000470167 TGFB3P10600 412 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 NAT2P11245 290 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 PSME1Q06323 249 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC15Q0P6D6 951 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 TRAF1Q13077 416 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 COL19A1Q14993 1142 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms