RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-210ENST00000470160 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
KDM3A-210ENST00000470160 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
KDM3A-210ENST00000470160 GPR108Q9NPR9 543 aa8.67□□□□□ -1.02
KDM3A-210ENST00000470160 CWC25Q9NXE8 425 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-210ENST00000470160 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-210ENST00000470160 MX1P20591 662 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 EIF5P55010 431 aaKnown RBP8.66□□□□□ -1.02
KDM3A-210ENST00000470160 TBC1D9Q6ZT07 1266 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 EXOC6BQ9Y2D4 811 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 PCCAP05165 728 aaPredicted RBP8.66□□□□□ -1.02
KDM3A-210ENST00000470160 PI4K2BQ8TCG2 481 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 RFX7Q2KHR2 1363 aa8.66□□□□□ -1.02
KDM3A-210ENST00000470160 CSF1RP07333 972 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 SDSP20132 328 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 PRIM1P49642 420 aaKnown RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 OTUD7AQ8TE49 926 aaPredicted RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 USP35Q9P2H5 1018 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 SURF6O75683 361 aaKnown RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 CIAO1O76071 339 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.02
KDM3A-210ENST00000470160 SNX21Q969T3 373 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
KDM3A-210ENST00000470160 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.03
KDM3A-210ENST00000470160 RGPD3A6NKT7 1758 aaPredicted RBP8.65□□□□□ -1.03
KDM3A-210ENST00000470160 RGPD4Q7Z3J3 1758 aa8.65□□□□□ -1.03
KDM3A-210ENST00000470160 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
KDM3A-210ENST00000470160 SASH1O94885 1247 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
KDM3A-210ENST00000470160 EPHA10Q5JZY3 1008 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 ZNF34Q8IZ26 560 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
KDM3A-210ENST00000470160 C22orf23Q9BZE7 217 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 RTL9Q8NET4 1388 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 PALLDQ8WX93 1383 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 A0A087WZG4 1122 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 ZBTB38Q8NAP3 1195 aaPredicted RBP8.64□□□□□ -1.03
KDM3A-210ENST00000470160 NGLY1Q96IV0 654 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 USP21Q9UK80 565 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 A0A1B0GUL6 1792 aa8.64□□□□□ -1.03
KDM3A-210ENST00000470160 BRWD3Q6RI45 1802 aa8.63□□□□□ -1.03
KDM3A-210ENST00000470160 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-210ENST00000470160 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-210ENST00000470160 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-210ENST00000470160 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-210ENST00000470160 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
KDM3A-210ENST00000470160 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
KDM3A-210ENST00000470160 SIK1P57059 783 aa8.63□□□□□ -1.03
KDM3A-210ENST00000470160 KIF2CQ99661 725 aa8.63□□□□□ -1.03
KDM3A-210ENST00000470160 ZBTB22O15209 634 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 GLRX3O76003 335 aaKnown RBP8.62□□□□□ -1.03
KDM3A-210ENST00000470160 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
KDM3A-210ENST00000470160 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
KDM3A-210ENST00000470160 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 C4BP0C0L5 1744 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 HSPA1LP34931 641 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 NLRP10Q86W26 655 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.62□□□□□ -1.03
KDM3A-210ENST00000470160 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 TRPC5Q9UL62 973 aaPredicted RBP8.62□□□□□ -1.03
KDM3A-210ENST00000470160 ZBTB1Q9Y2K1 713 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 ABCC12Q96J65 1359 aa8.62□□□□□ -1.03
KDM3A-210ENST00000470160 ERC2O15083 957 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
KDM3A-210ENST00000470160 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 C8orf37Q96NL8 207 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 ECHDC1Q9NTX5 307 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
KDM3A-210ENST00000470160 ITPK1Q13572 414 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 UBR3Q6ZT12 1888 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 CAMTA2O94983 1202 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 CHMLP26374 656 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 ATG9AQ7Z3C6 839 aa8.61□□□□□ -1.03
KDM3A-210ENST00000470160 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
KDM3A-210ENST00000470160 ZNF609O15014 1411 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 RIC1Q4ADV7 1423 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 REC8O95072 547 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 IL15P40933 162 aaPredicted RBP8.6□□□□□ -1.03
KDM3A-210ENST00000470160 CRKLP46109 303 aaKnown RBP8.6□□□□□ -1.03
KDM3A-210ENST00000470160 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
KDM3A-210ENST00000470160 ANAPC15P60006 121 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 BECN1Q14457 450 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
KDM3A-210ENST00000470160 GPATCH3Q96I76 525 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 AFF2P51816 1311 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 ATP5JP18859 108 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 EAF2Q96CJ1 260 aaPredicted RBP8.6□□□□□ -1.03
KDM3A-210ENST00000470160 ESYT1Q9BSJ8 1104 aa8.6□□□□□ -1.03
KDM3A-210ENST00000470160 RBM10P98175 930 aaKnown RBP8.59□□□□□ -1.03
KDM3A-210ENST00000470160 KCNB2Q92953 911 aa8.59□□□□□ -1.03
KDM3A-210ENST00000470160 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms