RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 ZPR1O75312 459 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 COL23A1Q86Y22 540 aaPredicted RBP13.07□□□□□ -0.32
THBS3-206ENST00000469769 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
THBS3-206ENST00000469769 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
THBS3-206ENST00000469769 GNAI2P04899 355 aa13.06□□□□□ -0.32
THBS3-206ENST00000469769 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
THBS3-206ENST00000469769 GYS1P13807 737 aa13.06□□□□□ -0.32
THBS3-206ENST00000469769 MTX1Q13505 466 aa13.06□□□□□ -0.32
THBS3-206ENST00000469769 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
THBS3-206ENST00000469769 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
THBS3-206ENST00000469769 UBTFL1P0CB47 393 aaPredicted RBP13.05□□□□□ -0.32
THBS3-206ENST00000469769 TM4SF1P30408 202 aa13.05□□□□□ -0.32
THBS3-206ENST00000469769 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
THBS3-206ENST00000469769 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
THBS3-206ENST00000469769 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
THBS3-206ENST00000469769 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
THBS3-206ENST00000469769 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
THBS3-206ENST00000469769 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
THBS3-206ENST00000469769 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
THBS3-206ENST00000469769 PHF14O94880 888 aa13.04□□□□□ -0.32
THBS3-206ENST00000469769 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
THBS3-206ENST00000469769 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
THBS3-206ENST00000469769 ANKRD44Q8N8A2 993 aa13.04□□□□□ -0.32
THBS3-206ENST00000469769 ARXQ96QS3 562 aa13.04□□□□□ -0.32
THBS3-206ENST00000469769 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
THBS3-206ENST00000469769 NTSR2O95665 410 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 GPTP24298 496 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 YY1P25490 414 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 NFIXQ14938 502 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
THBS3-206ENST00000469769 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
THBS3-206ENST00000469769 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.32
THBS3-206ENST00000469769 FOXO4P98177 505 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 UBE3BQ7Z3V4 1068 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 SLC16A10Q8TF71 515 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 UTP14AQ9BVJ6 771 aaKnown RBP13.02□□□□□ -0.33
THBS3-206ENST00000469769 KDM2BQ8NHM5 1336 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 LAMB2P55268 1798 aa13.02□□□□□ -0.33
THBS3-206ENST00000469769 MYH3P11055 1940 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 CSF1RP07333 972 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 POLA2Q14181 598 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 SSH3Q8TE77 659 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
THBS3-206ENST00000469769 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
THBS3-206ENST00000469769 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
THBS3-206ENST00000469769 IGHDP01880 384 aa13□□□□□ -0.33
THBS3-206ENST00000469769 FAM89AQ96GI7 184 aa13□□□□□ -0.33
THBS3-206ENST00000469769 NYXQ9GZU5 481 aa13□□□□□ -0.33
THBS3-206ENST00000469769 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
THBS3-206ENST00000469769 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 LRP5O75197 1615 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
THBS3-206ENST00000469769 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
THBS3-206ENST00000469769 TPTE2Q6XPS3 522 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
THBS3-206ENST00000469769 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
THBS3-206ENST00000469769 PDE8AO60658 829 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 DDR1Q08345 913 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 JARID2Q92833 1246 aaPredicted RBP12.98□□□□□ -0.33
THBS3-206ENST00000469769 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
THBS3-206ENST00000469769 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
THBS3-206ENST00000469769 HMMRO75330 724 aa12.97□□□□□ -0.33
THBS3-206ENST00000469769 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
THBS3-206ENST00000469769 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
THBS3-206ENST00000469769 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
THBS3-206ENST00000469769 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
THBS3-206ENST00000469769 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
THBS3-206ENST00000469769 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
THBS3-206ENST00000469769 SERPINB2P05120 415 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 CTSWP56202 376 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 PRR5LQ6MZQ0 368 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
THBS3-206ENST00000469769 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
THBS3-206ENST00000469769 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
THBS3-206ENST00000469769 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
THBS3-206ENST00000469769 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
THBS3-206ENST00000469769 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms