RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 PSME1Q06323 249 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
KCNC4-206ENST00000469655 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
KCNC4-206ENST00000469655 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 USP27XA6NNY8 438 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
KCNC4-206ENST00000469655 ST5P78524 1137 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 HDGFL1Q5TGJ6 251 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 FILIP1Q7Z7B0 1213 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
KCNC4-206ENST00000469655 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 ANKRD65E5RJM6 399 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 BMS1Q14692 1282 aaKnown RBP18.03■□□□□ 0.48
KCNC4-206ENST00000469655 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 EFCC1Q9HA90 598 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
KCNC4-206ENST00000469655 CRB1P82279 1406 aa18.02■□□□□ 0.48
KCNC4-206ENST00000469655 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
KCNC4-206ENST00000469655 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
KCNC4-206ENST00000469655 CCT4P50991 539 aaKnown RBP18.02■□□□□ 0.48
KCNC4-206ENST00000469655 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.48
KCNC4-206ENST00000469655 CCDC192P0DO97 292 aa18.02■□□□□ 0.47
KCNC4-206ENST00000469655 LGR6Q9HBX8 967 aa18.02■□□□□ 0.47
KCNC4-206ENST00000469655 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 CCDC34Q96HJ3 373 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 ZNF446Q9NWS9 450 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 RGS12O14924 1447 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 ATP10DQ9P241 1426 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 SETD1BQ9UPS6 1966 aaKnown RBP18.01■□□□□ 0.47
KCNC4-206ENST00000469655 A0A0G2JS52 829 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 KCNQ3O43525 872 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 ZSCAN26Q16670 478 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 BANK1Q8NDB2 785 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.01■□□□□ 0.47
KCNC4-206ENST00000469655 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 IGSF1Q8N6C5 1336 aa18.01■□□□□ 0.47
KCNC4-206ENST00000469655 KIAA0232Q92628 1395 aa18■□□□□ 0.47
KCNC4-206ENST00000469655 MPRIPQ6WCQ1 1025 aa18■□□□□ 0.47
KCNC4-206ENST00000469655 KLHDC4Q8TBB5 520 aa18■□□□□ 0.47
KCNC4-206ENST00000469655 CACTINQ8WUQ7 758 aaKnown RBP18■□□□□ 0.47
KCNC4-206ENST00000469655 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
KCNC4-206ENST00000469655 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
KCNC4-206ENST00000469655 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
KCNC4-206ENST00000469655 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
KCNC4-206ENST00000469655 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 MCCP23508 829 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 LMAN1P49257 510 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
KCNC4-206ENST00000469655 ICE2Q659A1 982 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 CEP170BQ9Y4F5 1589 aaPredicted RBP17.99■□□□□ 0.47
KCNC4-206ENST00000469655 CASQ1P31415 396 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 GEMIN8Q9NWZ8 242 aaKnown RBP17.99■□□□□ 0.47
KCNC4-206ENST00000469655 ITSN1Q15811 1721 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 ARHGEF10O15013 1369 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
KCNC4-206ENST00000469655 NBPF6Q5VWK0 638 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 NBPF4Q96M43 638 aa17.99■□□□□ 0.47
KCNC4-206ENST00000469655 C3P01024 1663 aa17.98■□□□□ 0.47
KCNC4-206ENST00000469655 GOLGA6L1Q8N7Z2 621 aa17.98■□□□□ 0.47
KCNC4-206ENST00000469655 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 UBE2HP62256 183 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 ARHGAP29Q52LW3 1261 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 MYCBPQ99417 103 aaPredicted RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 CLGNO14967 610 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 SEC31AO94979 1220 aaKnown RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 GPS2Q13227 327 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 SYCP1Q15431 976 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 PPP1R42Q7Z4L9 355 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 MON2Q7Z3U7 1717 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 SLU7O95391 586 aaKnown RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 NBPF7P0C2Y1 421 aaPredicted RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 TEFQ10587 303 aa17.97■□□□□ 0.47
KCNC4-206ENST00000469655 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
KCNC4-206ENST00000469655 UBR1Q8IWV7 1749 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 CLCN6P51797 869 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 ANO6Q4KMQ2 910 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 LRRN4CLQ8ND94 238 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 MYL6BP14649 208 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
KCNC4-206ENST00000469655 TXLNBQ8N3L3 684 aa17.96■□□□□ 0.47
KCNC4-206ENST00000469655 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.47
KCNC4-206ENST00000469655 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 GNAI3P08754 354 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
KCNC4-206ENST00000469655 EDC3Q96F86 508 aaKnown RBP17.95■□□□□ 0.46
KCNC4-206ENST00000469655 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 ORAI2Q96SN7 254 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 C9orf78Q9NZ63 289 aaPredicted RBP17.95■□□□□ 0.46
KCNC4-206ENST00000469655 A0A087WWV3 80 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 PI4KAP2A4QPH2 592 aa17.95■□□□□ 0.46
KCNC4-206ENST00000469655 PNMA6AP0CW24 399 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms