RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
NEDD9-207ENST00000468612 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
NEDD9-207ENST00000468612 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
NEDD9-207ENST00000468612 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
NEDD9-207ENST00000468612 MKI67P46013 3256 aaKnown RBP15.12■□□□□ 0.01
NEDD9-207ENST00000468612 HUNKP57058 714 aa15.12■□□□□ 0.01
NEDD9-207ENST00000468612 CTU1Q7Z7A3 348 aaKnown RBP15.12■□□□□ 0.01
NEDD9-207ENST00000468612 NIM1KQ8IY84 436 aa15.12■□□□□ 0.01
NEDD9-207ENST00000468612 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
NEDD9-207ENST00000468612 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
NEDD9-207ENST00000468612 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
NEDD9-207ENST00000468612 TEFQ10587 303 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
NEDD9-207ENST00000468612 SLC51AQ86UW1 340 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 IL17REQ8NFR9 667 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
NEDD9-207ENST00000468612 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 TRPA1O75762 1119 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
NEDD9-207ENST00000468612 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
NEDD9-207ENST00000468612 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 PANK3Q9H999 370 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 HPS5Q9UPZ3 1129 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
NEDD9-207ENST00000468612 HOXA10P31260 410 aaPredicted RBP15.09■□□□□ 0.01
NEDD9-207ENST00000468612 CXCL9Q07325 125 aa15.09■□□□□ 0.01
NEDD9-207ENST00000468612 RGMBQ6NW40 437 aa15.09■□□□□ 0.01
NEDD9-207ENST00000468612 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
NEDD9-207ENST00000468612 PPIP5K2O43314 1243 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 KCNQ3O43525 872 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 KIF23Q02241 960 aaPredicted RBP15.08■□□□□ 0
NEDD9-207ENST00000468612 TRPM4Q8TD43 1214 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 VPS33BQ9H267 617 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 RIC1Q4ADV7 1423 aa15.08■□□□□ 0
NEDD9-207ENST00000468612 AOC3Q16853 763 aa15.07■□□□□ 0
NEDD9-207ENST00000468612 CCDC102AQ96A19 550 aa15.07■□□□□ 0
NEDD9-207ENST00000468612 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
NEDD9-207ENST00000468612 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
NEDD9-207ENST00000468612 HLFQ16534 295 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 DLK2Q6UY11 383 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 USP48Q86UV5 1035 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 ZNRF3Q9ULT6 936 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
NEDD9-207ENST00000468612 AKAP11Q9UKA4 1901 aa15.05■□□□□ 0
NEDD9-207ENST00000468612 GNAT3A8MTJ3 354 aa15.05■□□□□ -0
NEDD9-207ENST00000468612 NBPF26B4DH59 902 aa15.05■□□□□ -0
NEDD9-207ENST00000468612 PPEF1O14829 653 aaPredicted RBP15.05■□□□□ -0
NEDD9-207ENST00000468612 PKN2Q16513 984 aaKnown RBP15.05■□□□□ -0
NEDD9-207ENST00000468612 NBPF10Q6P3W6 841 aaKnown RBP15.05■□□□□ -0
NEDD9-207ENST00000468612 NUTM1Q86Y26 1132 aa15.05■□□□□ -0
NEDD9-207ENST00000468612 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
NEDD9-207ENST00000468612 CRAMP1Q96RY5 1269 aa15.05■□□□□ -0
NEDD9-207ENST00000468612 CSRNP1Q96S65 589 aa15.05■□□□□ -0
NEDD9-207ENST00000468612 ZNF157P51786 506 aaPredicted RBP15.04■□□□□ -0
NEDD9-207ENST00000468612 NYXQ9GZU5 481 aa15.04■□□□□ -0
NEDD9-207ENST00000468612 GBA2Q9HCG7 927 aaPredicted RBP15.04■□□□□ -0
NEDD9-207ENST00000468612 SHTN1A0MZ66 631 aa15.03■□□□□ -0
NEDD9-207ENST00000468612 BTBD11A6QL63 1104 aa15.03■□□□□ -0
NEDD9-207ENST00000468612 SLC10A3P09131 477 aa15.03■□□□□ -0
NEDD9-207ENST00000468612 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
NEDD9-207ENST00000468612 RTFDC1Q9BY42 306 aaPredicted RBP15.03■□□□□ -0
NEDD9-207ENST00000468612 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
NEDD9-207ENST00000468612 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
NEDD9-207ENST00000468612 C2orf69Q8N8R5 385 aa15.02■□□□□ -0
NEDD9-207ENST00000468612 GAS2L2Q8NHY3 880 aa15.02■□□□□ -0
NEDD9-207ENST00000468612 BCL2L13Q9BXK5 485 aa15.02■□□□□ -0
NEDD9-207ENST00000468612 CNOT7Q9UIV1 285 aaKnown RBP15.02■□□□□ -0
NEDD9-207ENST00000468612 HTTP42858 3142 aa15.01□□□□□ -0.01
NEDD9-207ENST00000468612 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
NEDD9-207ENST00000468612 FXR1P51114 621 aaKnown RBP eCLIP15.01□□□□□ -0.01
NEDD9-207ENST00000468612 TNIP1Q15025 636 aa15.01□□□□□ -0.01
NEDD9-207ENST00000468612 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
NEDD9-207ENST00000468612 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
NEDD9-207ENST00000468612 H7C1D1 291 aa15□□□□□ -0.01
NEDD9-207ENST00000468612 RAD17O75943 681 aa15□□□□□ -0.01
NEDD9-207ENST00000468612 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
NEDD9-207ENST00000468612 MICALL2Q8IY33 904 aa15□□□□□ -0.01
NEDD9-207ENST00000468612 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
NEDD9-207ENST00000468612 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
NEDD9-207ENST00000468612 KIAA2012Q0VF49 1180 aa14.99□□□□□ -0.01
NEDD9-207ENST00000468612 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
NEDD9-207ENST00000468612 SZT2Q5T011 3432 aa14.98□□□□□ -0.01
NEDD9-207ENST00000468612 YDJCA8MPS7 323 aa14.98□□□□□ -0.01
NEDD9-207ENST00000468612 ERVV-1B6SEH8 477 aa14.98□□□□□ -0.01
NEDD9-207ENST00000468612 ADM5C9JUS6 153 aa14.98□□□□□ -0.01
NEDD9-207ENST00000468612 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
NEDD9-207ENST00000468612 ZNF296Q8WUU4 475 aaPredicted RBP14.98□□□□□ -0.01
NEDD9-207ENST00000468612 UBN2Q6ZU65 1347 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
NEDD9-207ENST00000468612 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 RASAL3Q86YV0 1011 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 DPF2Q92785 391 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 HDAC9Q9UKV0 1011 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
NEDD9-207ENST00000468612 POLR2AP24928 1970 aaKnown RBP14.96□□□□□ -0.01
NEDD9-207ENST00000468612 CENPFP49454 3210 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms