RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SNX21Q969T3 373 aa12.45□□□□□ -0.42
MSH5-213ENST00000468136 CCDC87Q9NVE4 849 aa12.45□□□□□ -0.42
MSH5-213ENST00000468136 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
MSH5-213ENST00000468136 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 ATP5J2-PTCD1G3V325 749 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 ONECUT3O60422 494 aaPredicted RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 MCCP23508 829 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 IL15P40933 162 aaPredicted RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 EIF5P55010 431 aaKnown RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
MSH5-213ENST00000468136 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 RUFY2Q8WXA3 655 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
MSH5-213ENST00000468136 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
MSH5-213ENST00000468136 PTPN12Q05209 780 aaKnown RBP12.43□□□□□ -0.42
MSH5-213ENST00000468136 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
MSH5-213ENST00000468136 GJD4Q96KN9 370 aaPredicted RBP12.43□□□□□ -0.42
MSH5-213ENST00000468136 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
MSH5-213ENST00000468136 TRIM6-TRIM34B2RNG4 842 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
MSH5-213ENST00000468136 ANAPC15P60006 121 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 FOXO4P98177 505 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 RABEP1Q15276 862 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
MSH5-213ENST00000468136 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 SLC4A9Q96Q91 983 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 ZBTB1Q9Y2K1 713 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 RREB1Q92766 1687 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
MSH5-213ENST00000468136 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 ATRNO75882 1429 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 SASH1O94885 1247 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 CSF1RP07333 972 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 CHMLP26374 656 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 TJP1Q07157 1748 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 CCDC57Q2TAC2 916 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 AACSQ86V21 672 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 NLRP10Q86W26 655 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
MSH5-213ENST00000468136 EYA2O00167 538 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
MSH5-213ENST00000468136 INTS5Q6P9B9 1019 aaKnown RBP12.4□□□□□ -0.42
MSH5-213ENST00000468136 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 IL17RAQ96F46 866 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
MSH5-213ENST00000468136 AKAP2Q9Y2D5 859 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
MSH5-213ENST00000468136 RAD50Q92878 1312 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 PDE8AO60658 829 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 HSPA1LP34931 641 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 TNNI3KQ59H18 835 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSH5-213ENST00000468136 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
MSH5-213ENST00000468136 FPGT-TNNI3KV9GXZ4 949 aa12.39□□□□□ -0.43
MSH5-213ENST00000468136 AFF2P51816 1311 aa12.38□□□□□ -0.43
MSH5-213ENST00000468136 ATP5JP18859 108 aa12.38□□□□□ -0.43
MSH5-213ENST00000468136 MCM2P49736 904 aa12.38□□□□□ -0.43
MSH5-213ENST00000468136 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
MSH5-213ENST00000468136 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
MSH5-213ENST00000468136 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
MSH5-213ENST00000468136 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 A0A0G2JS52 829 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 MYT1Q01538 1121 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 ARXQ96QS3 562 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 TBC1D2Q9BYX2 928 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 DIAPH3Q9NSV4 1193 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
MSH5-213ENST00000468136 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 ST18O60284 1047 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 CAMTA2O94983 1202 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
MSH5-213ENST00000468136 SIL1Q9H173 461 aa12.36□□□□□ -0.43
MSH5-213ENST00000468136 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
MSH5-213ENST00000468136 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
MSH5-213ENST00000468136 SGSM2O43147 1006 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 CTSWP56202 376 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 TFCP2Q12800 502 aa12.35□□□□□ -0.43
MSH5-213ENST00000468136 ITPK1Q13572 414 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms