RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 FOXO4P98177 505 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 KRT27Q7Z3Y8 459 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
PRPF3-202ENST00000467329 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 USP42Q9H9J4 1324 aaKnown RBP11.65□□□□□ -0.54
PRPF3-202ENST00000467329 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.54
PRPF3-202ENST00000467329 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-202ENST00000467329 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
PRPF3-202ENST00000467329 NLRP10Q86W26 655 aa11.65□□□□□ -0.54
PRPF3-202ENST00000467329 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-202ENST00000467329 CAMTA2O94983 1202 aa11.65□□□□□ -0.55
PRPF3-202ENST00000467329 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.55
PRPF3-202ENST00000467329 AK7Q96M32 723 aa11.65□□□□□ -0.55
PRPF3-202ENST00000467329 LAMB2P55268 1798 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 PDE1AP54750 535 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 HLFQ16534 295 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 MX1P20591 662 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRPF3-202ENST00000467329 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
PRPF3-202ENST00000467329 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-202ENST00000467329 APBB1O00213 710 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 OS9Q13438 667 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-202ENST00000467329 FBXO41Q8TF61 875 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-202ENST00000467329 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 PTF1AQ7RTS3 328 aa11.63□□□□□ -0.55
PRPF3-202ENST00000467329 OTUD7AQ8TE49 926 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-202ENST00000467329 CDC45O75419 566 aa11.62□□□□□ -0.55
PRPF3-202ENST00000467329 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 GSPT1P15170 499 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
PRPF3-202ENST00000467329 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
PRPF3-202ENST00000467329 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
PRPF3-202ENST00000467329 TTC41PQ6P2S7 1318 aa11.62□□□□□ -0.55
PRPF3-202ENST00000467329 PTPN12Q05209 780 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
PRPF3-202ENST00000467329 CIAO1O76071 339 aa11.61□□□□□ -0.55
PRPF3-202ENST00000467329 CSF1RP07333 972 aa11.61□□□□□ -0.55
PRPF3-202ENST00000467329 PA2G4Q9UQ80 394 aaKnown RBP11.61□□□□□ -0.55
PRPF3-202ENST00000467329 MYH3P11055 1940 aa11.61□□□□□ -0.55
PRPF3-202ENST00000467329 COL24A1Q17RW2 1714 aa11.61□□□□□ -0.55
PRPF3-202ENST00000467329 GPATCH3Q96I76 525 aa11.61□□□□□ -0.55
PRPF3-202ENST00000467329 RGPD3A6NKT7 1758 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-202ENST00000467329 RGPD4Q7Z3J3 1758 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-202ENST00000467329 ARXQ96QS3 562 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 LRP5O75197 1615 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 SASH1O94885 1247 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 ADRA2BP18089 450 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 IL1RAPL2Q9NP60 686 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
PRPF3-202ENST00000467329 RTL9Q8NET4 1388 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 GPTP24298 496 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 RXRBP28702 533 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
PRPF3-202ENST00000467329 NARFQ9UHQ1 456 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
PRPF3-202ENST00000467329 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 PDE8AO60658 829 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 SDSP20132 328 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-202ENST00000467329 CTSWP56202 376 aa11.59□□□□□ -0.55
PRPF3-202ENST00000467329 DDX60Q8IY21 1712 aaKnown RBP11.58□□□□□ -0.56
PRPF3-202ENST00000467329 SH3TC1Q8TE82 1336 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 ERC2O15083 957 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 FAM89AQ96GI7 184 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 RTCBQ9Y3I0 505 aaKnown RBP11.58□□□□□ -0.56
PRPF3-202ENST00000467329 IRS4O14654 1257 aaPredicted RBP11.58□□□□□ -0.56
PRPF3-202ENST00000467329 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
PRPF3-202ENST00000467329 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
PRPF3-202ENST00000467329 PI4K2BQ8TCG2 481 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
PRPF3-202ENST00000467329 EYA2O00167 538 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 GNPATO15228 680 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 NTSR2O95665 410 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 ECHDC1Q9NTX5 307 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 SEC24BO95487 1268 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 AACSQ86V21 672 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
PRPF3-202ENST00000467329 IFIT5Q13325 482 aaKnown RBP11.56□□□□□ -0.56
PRPF3-202ENST00000467329 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
PRPF3-202ENST00000467329 TTLL11Q8NHH1 800 aa11.56□□□□□ -0.56
PRPF3-202ENST00000467329 SIL1Q9H173 461 aa11.56□□□□□ -0.56
PRPF3-202ENST00000467329 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms