RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
SRPRB-202ENST00000466636 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
SRPRB-202ENST00000466636 A0A087WZG4 1122 aa11.83□□□□□ -0.52
SRPRB-202ENST00000466636 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
SRPRB-202ENST00000466636 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
SRPRB-202ENST00000466636 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
SRPRB-202ENST00000466636 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
SRPRB-202ENST00000466636 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
SRPRB-202ENST00000466636 NHSQ6T4R5 1651 aa11.83□□□□□ -0.52
SRPRB-202ENST00000466636 RREB1Q92766 1687 aa11.83□□□□□ -0.52
SRPRB-202ENST00000466636 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 APBB1O00213 710 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
SRPRB-202ENST00000466636 HLFQ16534 295 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
SRPRB-202ENST00000466636 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
SRPRB-202ENST00000466636 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
SRPRB-202ENST00000466636 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
SRPRB-202ENST00000466636 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
SRPRB-202ENST00000466636 ZNF772Q68DY9 489 aaPredicted RBP11.81□□□□□ -0.52
SRPRB-202ENST00000466636 DZIP3Q86Y13 1208 aaKnown RBP11.81□□□□□ -0.52
SRPRB-202ENST00000466636 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
SRPRB-202ENST00000466636 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
SRPRB-202ENST00000466636 FOXO4P98177 505 aa11.8□□□□□ -0.52
SRPRB-202ENST00000466636 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
SRPRB-202ENST00000466636 RHPN1Q8TCX5 695 aa11.8□□□□□ -0.52
SRPRB-202ENST00000466636 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
SRPRB-202ENST00000466636 TBC1D2BQ9UPU7 963 aa11.8□□□□□ -0.52
SRPRB-202ENST00000466636 CAMTA2O94983 1202 aa11.79□□□□□ -0.52
SRPRB-202ENST00000466636 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
SRPRB-202ENST00000466636 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
SRPRB-202ENST00000466636 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
SRPRB-202ENST00000466636 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
SRPRB-202ENST00000466636 KRT27Q7Z3Y8 459 aa11.79□□□□□ -0.52
SRPRB-202ENST00000466636 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
SRPRB-202ENST00000466636 KIF1BPQ96EK5 621 aa11.79□□□□□ -0.52
SRPRB-202ENST00000466636 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
SRPRB-202ENST00000466636 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
SRPRB-202ENST00000466636 PDE1AP54750 535 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
SRPRB-202ENST00000466636 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
SRPRB-202ENST00000466636 ARXQ96QS3 562 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 COPRSQ9NQ92 184 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 CDHR2Q9BYE9 1310 aa11.78□□□□□ -0.52
SRPRB-202ENST00000466636 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
SRPRB-202ENST00000466636 SEC24BO95487 1268 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 GPTP24298 496 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 KCNQ4P56696 695 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
SRPRB-202ENST00000466636 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 IL1RAPL2Q9NP60 686 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
SRPRB-202ENST00000466636 AOX1Q06278 1338 aa11.77□□□□□ -0.53
SRPRB-202ENST00000466636 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
SRPRB-202ENST00000466636 RGL2O15211 777 aa11.76□□□□□ -0.53
SRPRB-202ENST00000466636 SASH1O94885 1247 aa11.76□□□□□ -0.53
SRPRB-202ENST00000466636 MX1P20591 662 aa11.76□□□□□ -0.53
SRPRB-202ENST00000466636 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
SRPRB-202ENST00000466636 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
SRPRB-202ENST00000466636 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
SRPRB-202ENST00000466636 UBN2Q6ZU65 1347 aa11.76□□□□□ -0.53
SRPRB-202ENST00000466636 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
SRPRB-202ENST00000466636 BTAF1O14981 1849 aa11.75□□□□□ -0.53
SRPRB-202ENST00000466636 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
SRPRB-202ENST00000466636 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRPRB-202ENST00000466636 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
SRPRB-202ENST00000466636 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
SRPRB-202ENST00000466636 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
SRPRB-202ENST00000466636 CSF1RP07333 972 aa11.74□□□□□ -0.53
SRPRB-202ENST00000466636 SDSP20132 328 aa11.74□□□□□ -0.53
SRPRB-202ENST00000466636 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
SRPRB-202ENST00000466636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.74□□□□□ -0.53
SRPRB-202ENST00000466636 CDC45O75419 566 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 PARP10Q53GL7 1025 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 SUSD4Q5VX71 490 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 CLEC4GQ6UXB4 293 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 SYNE4Q8N205 404 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
SRPRB-202ENST00000466636 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
SRPRB-202ENST00000466636 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SRPRB-202ENST00000466636 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
SRPRB-202ENST00000466636 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
SRPRB-202ENST00000466636 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
SRPRB-202ENST00000466636 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
SRPRB-202ENST00000466636 GNPATO15228 680 aa11.72□□□□□ -0.53
SRPRB-202ENST00000466636 TRIM37O94972 964 aa11.72□□□□□ -0.53
SRPRB-202ENST00000466636 RXRBP28702 533 aa11.72□□□□□ -0.53
SRPRB-202ENST00000466636 ANP32AP39687 249 aaKnown RBP11.72□□□□□ -0.53
SRPRB-202ENST00000466636 TBC1D9Q6ZT07 1266 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms