RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GPTP24298 496 aa12.56□□□□□ -0.4
PMF1-204ENST00000466489 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
PMF1-204ENST00000466489 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
PMF1-204ENST00000466489 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
PMF1-204ENST00000466489 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
PMF1-204ENST00000466489 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
PMF1-204ENST00000466489 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
PMF1-204ENST00000466489 PDE6BP35913 854 aa12.55□□□□□ -0.4
PMF1-204ENST00000466489 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
PMF1-204ENST00000466489 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
PMF1-204ENST00000466489 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
PMF1-204ENST00000466489 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
PMF1-204ENST00000466489 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 TGFB2P61812 414 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 G2E3Q7L622 706 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 DNAAF4Q8WXU2 420 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 MYD88Q99836 296 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
PMF1-204ENST00000466489 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
PMF1-204ENST00000466489 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 NLRP10Q86W26 655 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
PMF1-204ENST00000466489 ADCY9O60503 1353 aa12.53□□□□□ -0.4
PMF1-204ENST00000466489 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 H0YIN7 160 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.41
PMF1-204ENST00000466489 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
PMF1-204ENST00000466489 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
PMF1-204ENST00000466489 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
PMF1-204ENST00000466489 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
PMF1-204ENST00000466489 SLC4A10Q6U841 1118 aa12.51□□□□□ -0.41
PMF1-204ENST00000466489 LAMB2P55268 1798 aa12.51□□□□□ -0.41
PMF1-204ENST00000466489 MYH3P11055 1940 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 NTSR2O95665 410 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
PMF1-204ENST00000466489 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
PMF1-204ENST00000466489 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
PMF1-204ENST00000466489 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 F6X3S4 739 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 C2CD5Q86YS7 1000 aa12.49□□□□□ -0.41
PMF1-204ENST00000466489 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
PMF1-204ENST00000466489 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
PMF1-204ENST00000466489 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
PMF1-204ENST00000466489 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
PMF1-204ENST00000466489 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
PMF1-204ENST00000466489 PCCAP05165 728 aaPredicted RBP12.48□□□□□ -0.41
PMF1-204ENST00000466489 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
PMF1-204ENST00000466489 BECN1Q14457 450 aa12.48□□□□□ -0.41
PMF1-204ENST00000466489 ZKSCAN2Q63HK3 967 aa12.48□□□□□ -0.41
PMF1-204ENST00000466489 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
PMF1-204ENST00000466489 C9orf78Q9NZ63 289 aaPredicted RBP12.48□□□□□ -0.41
PMF1-204ENST00000466489 PIM2Q9P1W9 311 aa12.48□□□□□ -0.41
PMF1-204ENST00000466489 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
PMF1-204ENST00000466489 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
PMF1-204ENST00000466489 NPR1P16066 1061 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 DPEP1P16444 411 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 GCKRQ14397 625 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 GPR162Q16538 588 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
PMF1-204ENST00000466489 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 CNKSR1Q969H4 720 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.41
PMF1-204ENST00000466489 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
PMF1-204ENST00000466489 COL11A2P13942 1736 aaPredicted RBP12.47□□□□□ -0.41
PMF1-204ENST00000466489 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
PMF1-204ENST00000466489 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
PMF1-204ENST00000466489 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 ABCC12Q96J65 1359 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 CDHR2Q9BYE9 1310 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.41
PMF1-204ENST00000466489 A0A0G2JLW4 131 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 BCAR3O75815 825 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 IGKV5-2P06315 115 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 DEKP35659 375 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms